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BaseInfo

ncRNA ID novel_jre_miR634
Species Juglans regia
Class miRNA
Genome position NW_017389860.1:2379848-2379965 [+]
Reference genome wgs.5d
Source SRR1170963
Length 24
Mature sequence(if miRNA) 95 - AAAGUGACUGCACGGUACUUGCGC - 118
Stem-loop(if miRNA) --     GG                     -     AUAAAUAUAA  CU   -  G      AA
  GCAAG  UCGUGCAGUCGCUUUAAAAAA AGUGA          GA  CAC AU AAAAGA  U
  |||||  ||||||||||||||||||||| |||||          ||  ||| || ||||||
  CGUUC  GGCACGUCAGUGAAAUUUUUU UCACU          CU  GUG UA UUUUUU  U
CG     AU                     C     ----------  AG   A  A      AA
Stem-loop sequence GCAAGGGUCGUGCAGUCGCUUUAAAAAAAGUGAAUAAAUAUAAGACUCACAUGAAAAGAAAUUAAUUUUUUAAUAGUGGAUCUCACUCUUUUUUAAAGUGACUGCACGGUACUUGCGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018994468.1
ncRNA:24   CGCGUUCAUGGCACGUCAGUGAAA   1
  ||||||||||||||||||||||||
targets:1448   GCGCAAGUACCGUGCAGUCACUUU   1471

0.0 PREDICTED: Juglans regia serine/threonine-protein phosphatase PP1-like (LOC109012694), transcript variant X6, mRNA NA coding protein psRNATarget