ncRNA ID | novel_jre_miR634 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017389860.1:2379848-2379965 [+] |
Reference genome | wgs.5d |
Source | SRR1170963 |
Length | 24 |
Mature sequence(if miRNA) | 95 - AAAGUGACUGCACGGUACUUGCGC - 118 |
Stem-loop(if miRNA) |
--     GG                     -     AUAAAUAUAA  CU   -  G      AA   GCAAG  UCGUGCAGUCGCUUUAAAAAA AGUGA          GA  CAC AU AAAAGA  U   |||||  ||||||||||||||||||||| |||||          ||  ||| || ||||||   CGUUC  GGCACGUCAGUGAAAUUUUUU UCACU          CU  GUG UA UUUUUU  U CG     AU                     C     ----------  AG   A  A      AA |
Stem-loop sequence | GCAAGGGUCGUGCAGUCGCUUUAAAAAAAGUGAAUAAAUAUAAGACUCACAUGAAAAGAAAUUAAUUUUUUAAUAGUGGAUCUCACUCUUUUUUAAAGUGACUGCACGGUACUUGCGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018994468.1 |
|
0.0 | PREDICTED: Juglans regia serine/threonine-protein phosphatase PP1-like (LOC109012694), transcript variant X6, mRNA | NA | coding protein | psRNATarget |