ncRNA ID | novel_jre_miR631 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017389666.1:627278-627376 [+] |
Reference genome | wgs.5d |
Source | SRR1170962 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GUGUGAGAAUGAAUAGUGACUGAU - 24 |
Stem-loop(if miRNA) |
--   U A      A     A      --U     AAA   CAUCUCUUCA   GUG G GAAUGA UAGUG CUGAUG   AUAAU   UCU          A   ||| | |||||| ||||| ||||||   |||||   |||          A   CAC C UUUAUU AUCAU GAUUAU   UAUUA   AGA          U CU   - A      -     C      UCU     AAA   AAAUAAAUAU |
Stem-loop sequence | GUGUGAGAAUGAAUAGUGACUGAUGUAUAAUAAAUCUCAUCUCUUCAAAUUAUAAAUAAAAGAAAAAUUAUUCUUAUUAGCUACUAUUAUUUACCACUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018987860.1 |
|
2.0 | PREDICTED: Juglans regia putative kinase-like protein TMKL1 (LOC109007948), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_018982907.1 |
|
2.5 | PREDICTED: Juglans regia microtubule-binding protein TANGLED-like (LOC109004374), mRNA | NA | coding protein | psRNATarget |