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BaseInfo

ncRNA ID novel_jre_miR627
Species Juglans regia
Class miRNA
Genome position NW_017388809.1:40395-40454 [-]
Reference genome wgs.5d
Source SRR1170962
Length 24
Mature sequence(if miRNA) 1 - AACGACUGUAGAUCCCCGAAAAGU - 24
Stem-loop(if miRNA) --G          G      G        A
   UUUUGGGGAU UACAGU GUUCCCCA A
   |||||||||| |||||| ||||||||
   AAAGCCCCUA AUGUCA CAAGGGGU U
UGA          G      G        A
Stem-loop sequence GUUUUGGGGAUGUACAGUGGUUCCCCAAAUAUGGGGAACGACUGUAGAUCCCCGAAAAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018972713.1
ncRNA:24   UGAAAAGCCCCUAGAUGUCAGCAA   1
  **||||*|||||||||||||||||
targets:92   UGUUUUAGGGGAUCUACAGUCGUU   115

1.0 PREDICTED: Juglans regia probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 (LOC108996689), transcript variant X1, mRNA NA coding protein psRNATarget