| ncRNA ID | novel_jre_miR618 |
| Species | Juglans regia |
| Class | miRNA |
| Genome position | NW_017389895.1:26344-26561 [+] |
| Reference genome | wgs.5d |
| Source | SRR1170961 |
| Length | 21 |
| Mature sequence(if miRNA) | 1 - UUUCCCUCUCUGCCUCCGCCU - 21 |
| Stem-loop(if miRNA) |
-- G A C C A A C C GA AGC --A CUG GAU UUUCCCUCUCUGCCUCC CCUCCCC UGGCUGCCAUGGUGGU GGGGACCACCU AGG CC GCAGAAGC GC GGU UCCA GGC CCGU GCGGGGG G ||||||||||||||||| ||||||| |||||||||||||||| ||||||||||| ||| || |||||||| || ||| |||| ||| |||| ||||||| AAAGGGAGAGAUGGAGG GGAGGGG ACCGGCGGUACCACCA CCCCUGGUGGA UCC GG CGUCUUCG CG CCG AGGU UCG GGCA UGCCCUC G GG G C A A C C U A UC -GU AAC -CG GAG |
| Stem-loop sequence | UUUCCCUCUCUGCCUCCGCCUCCCCAUGGCUGCCAUGGUGGUCGGGGACCACCUCAGGACCAGCAGAAGCCGCCGGUGAUCCAAGCGGCACCGUCUGGCGGGGGGAUGGGAGCUCCCGUGCACGGCAAGCUUGUGGACUGCCAGCUGCUUCUGCCGGCCCUAAGGUGGUCCCCAACCACCAUGGCGGCCACGGGGAGGGGGAGGUAGAGAGGGAAAGG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_018995375.1 |
|
2.5 | PREDICTED: Juglans regia bifunctional phosphatase IMPL2, chloroplastic-like (LOC109013338), mRNA | NA | coding protein | psRNATarget | |||||||||
| XM_018958112.1 |
|
3.0 | PREDICTED: Juglans regia uncharacterized LOC108985706 (LOC108985706), mRNA | NA | coding protein | psRNATarget |