ncRNA ID | novel_jre_miR596 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017388999.1:3792-3900 [-] |
Reference genome | wgs.5d |
Source | SRR1170960;SRR1170964 |
Length | 21 |
Mature sequence(if miRNA) | 89 - UUUGGCAUUCUGUCCACCUCC - 109 |
Stem-loop(if miRNA) |
--        U   U  A      --------    -     UGCAU          CU   UUUGGCAU CUG CC CCUCCA        UGGC AGGCA     GCUUCAUGUU  U   |||||||| ||| || ||||||        |||| |||||     ||||||||||   AAGCUGUA GAC GG GGAGGU        GUCG UUUGU     UGAAGUACAA  G UU        C   C  C      UAAUUAUA    C     UUAAU          UU |
Stem-loop sequence | UUUGGCAUUCUGUCCACCUCCAUGGCAGGCAUGCAUGCUUCAUGUUCUUGUUAACAUGAAGUUAAUUUGUUUCGCUGAUAUUAAUUGGAGGCGGCCAGCAUGUCGAAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018990776.1 |
|
1.0 | PREDICTED: Juglans regia F-box only protein 6-like (LOC109010064), mRNA | NA | coding protein | psRNATarget | |||||||||
XM_018981234.1 |
|
1.0 | PREDICTED: Juglans regia F-box only protein 6 (LOC109003194), mRNA | NA | coding protein | psRNATarget |