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BaseInfo

ncRNA ID	novel_jre_miR595
Species	Juglans regia
Class	miRNA
Genome position	NW_017388986.1:101769-101935 [-]
Reference genome	wgs.5d
Source	SRR1170960
Length	25
Mature sequence(if miRNA)	143 - AAUGAUACUUGCAGUCGUGAGCAUG - 167
Stem-loop(if miRNA)	--    A   U            -CA     U  C                    -   AAAUAAAUAAG   CC -  -  G      AA   AAUG UAC UGCAGUCGUGAG   UGCAG CG CGUGCAGUCGCUUUGAAAAA AGU           GGA  C AC AU AAAAGA  U   |||| ||| ||||||||||||   ||||| || |||||||||||||||||||| |||           |||  | || || ||||||   UUAC AUG AUGUCAGCACUU   GCGUU GC GCACGUCAGCGAAACUUUUU UCA           CCU  G UG UA UUUUUU  U CA    G   U            UAC     U  A                    C   -----------   CA A  A  A      AA
Stem-loop sequence	AAUGAUACUUGCAGUCGUGAGCAUGCAGUCGCCGUGCAGUCGCUUUGAAAAAAGUAAAUAAAUAAGGGACCCACAUGAAAAGAAAUUAAUUUUUUAAUAGUAGACUCCACUCUUUUUCAAAGCGACUGCACGACGUUUGCGCAUUUCACGACUGUAUGUAGCAUUAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018952930.1	ncRNA:25   GUACG--AGUGCUGACGUUCAUAGUAA   1   ==|||--||||||||||||*||||||| targets:3294   UGUGCAUUCACGACUGCAACUAUCAUU   3320 Target Full Sequence	1.5	PREDICTED: Juglans regia pullulanase 1, chloroplastic (LOC108981688), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018952929.1	ncRNA:25   GUACG--AGUGCUGACGUUCAUAGUAA   1   ==|||--||||||||||||*||||||| targets:3297   UGUGCAUUCACGACUGCAACUAUCAUU   3323 Target Full Sequence	1.5	PREDICTED: Juglans regia pullulanase 1, chloroplastic (LOC108981688), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018970092.1	ncRNA:25   GUACGAGUGCUGACGUUCAUAGUAA   1   ||*||*|||*|||||||*||||||| targets:3859   CACGCACACAACUGCAACUAUCAUU   3883 Target Full Sequence	2.5	PREDICTED: Juglans regia translation initiation factor eIF-2B subunit epsilon (LOC108994766), transcript variant X6, mRNA	NA	coding protein	psRNATarget