ncRNA ID | novel_jre_miR587 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017462734.1:75-164 [+] |
Reference genome | wgs.5d |
Source | SRR1170960;SRR1170962;SRR1170963;SRR1170968;SRR1168880;SRR1170970;SRR1168881;SRR1168884;SRR1168886 |
Length | 24 |
Mature sequence(if miRNA) | 67 - AAUGACUAUUGUAUUGCCUUGGCC - 90 |
Stem-loop(if miRNA) |
--                     C                    G   CCAAGGCAAUACAAUAGUCAU UUUAAGCAAUGUGGGACUUA U   ||||||||||||||||||||| ||||||||||||||||||||   GGUUCCGUUAUGUUAUCAGUA AAAUUCGUUACACUCUGAAU A CC                     A                    G |
Stem-loop sequence | CCAAGGCAAUACAAUAGUCAUCUUUAAGCAAUGUGGGACUUAGUAGUAAGUCUCACAUUGCUUAAAAAUGACUAUUGUAUUGCCUUGGCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018972167.1 |
|
2.5 | PREDICTED: Juglans regia trihelix transcription factor GT-2-like (LOC108996329), mRNA | NA | coding protein | psRNATarget |