ncRNA ID | novel_jre_miR586 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017443593.1:30880-31026 [-] |
Reference genome | wgs.5d |
Source | SRR1170960;SRR1170966 |
Length | 24 |
Mature sequence(if miRNA) | 124 - ACAGUCGUAGAAUGCGCAAACGCC - 147 |
Stem-loop(if miRNA) |
--A       A  A  C       C            A       ------     -   UUCAC        A  U    CAGUCGU GA UG GCAAACG CGUGCAGUCGCU UGAAAAA      GAGUG GAG     UAUUAAAA AA U    ||||||| || || ||||||| |||||||||||| |||||||      ||||| |||     |||||||| || A    GUCAGCA CU AC CGUUUGC GCACGUCAGCGA AUUUUUU      UUUAU CUC     GUAAUUUU UU A AAC       -  C  A       A            A       UAUUUA     A   UGAAU        C  U |
Stem-loop sequence | ACAGUCGUAGAAUGCGCAAACGCCGUGCAGUCGCUAUGAAAAAGAGUGGAGUUCACUAUUAAAAAAAUUAAUUUCUUUUAAUGUAAGUCUCAUAUUUAUUUAUUUUUUUAAAGCGACUGCACGACGUUUGCACACUCACGACUGCAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_019002939.1 |
|
1.0 | PREDICTED: Juglans regia ras-related protein Rab-44-like (LOC109020475), mRNA | NA | coding protein | psRNATarget |