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BaseInfo

ncRNA ID novel_jre_miR586
Species Juglans regia
Class miRNA
Genome position NW_017443593.1:30880-31026 [-]
Reference genome wgs.5d
Source SRR1170960;SRR1170966
Length 24
Mature sequence(if miRNA) 124 - ACAGUCGUAGAAUGCGCAAACGCC - 147
Stem-loop(if miRNA) --A       A  A  C       C            A       ------     -   UUCAC        A  U
   CAGUCGU GA UG GCAAACG CGUGCAGUCGCU UGAAAAA      GAGUG GAG     UAUUAAAA AA U
   ||||||| || || ||||||| |||||||||||| |||||||      ||||| |||     |||||||| || A
   GUCAGCA CU AC CGUUUGC GCACGUCAGCGA AUUUUUU      UUUAU CUC     GUAAUUUU UU A
AAC       -  C  A       A            A       UAUUUA     A   UGAAU        C  U
Stem-loop sequence ACAGUCGUAGAAUGCGCAAACGCCGUGCAGUCGCUAUGAAAAAGAGUGGAGUUCACUAUUAAAAAAAUUAAUUUCUUUUAAUGUAAGUCUCAUAUUUAUUUAUUUUUUUAAAGCGACUGCACGACGUUUGCACACUCACGACUGCAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_019002939.1
ncRNA:24   CCGCAAACGCGUAAGAUGCUGACA   1
  |*|||||||||||||||||||||*
targets:183   GACGUUUGCGCAUUCUACGACUGA   206

1.0 PREDICTED: Juglans regia ras-related protein Rab-44-like (LOC109020475), mRNA NA coding protein psRNATarget