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BaseInfo

ncRNA ID novel_jre_miR582
Species Juglans regia
Class miRNA
Genome position NW_017443578.1:1137046-1137198 [+]
Reference genome wgs.5d
Source SRR1170960
Length 24
Mature sequence(if miRNA) 130 - AGAUGGAACAUCCGUUGUAGAGCA - 153
Stem-loop(if miRNA) --            CU             C U    UG   U  A                -UCUU G   --   CU
  CUCUGCAGCGGG  UUCCAUCUACCAU U AUAU  AAA AA CGACUUGCUGCAUAUU     U CUC  CGG  U
  ||||||||||||  ||||||||||||| | ||||  ||| || ||||||||||||||||     | |||  |||
  GAGAUGUUGCCU  AAGGUAGAUGGUA A UAUA  UUU UU GCUGAACGACGUAUAG     A GAG  GCC  C
AC            AC             A C    GU   C  C                UAUAU G   AU   UU
Stem-loop sequence CUCUGCAGCGGGCUUUCCAUCUACCAUCUUAUAUUGAAAUAAACGACUUGCUGCAUAUUUCUUUGCUCCGGCUUCUUCCGUAGAGGAUAUAUGAUAUGCAGCAAGUCGCUUCUUUUGAUAUCAAAUGGUAGAUGGAACAUCCGUUGUAGAGCA