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BaseInfo

ncRNA ID novel_jre_miR580
Species Juglans regia
Class miRNA
Genome position NW_017443570.1:546237-546364 [-]
Reference genome wgs.5d
Source SRR1170960
Length 24
Mature sequence(if miRNA) 105 - AUUGUACAACCGUCGCGUAAUCGU - 128
Stem-loop(if miRNA) AUU     --AC                         ----UGA   AAAUAUAAAACUCACAUGA
   GUACA    CGUCGCGUAAUCGUUUUGAAAAAAA       AUA                   A
   |||||    |||||||||||||||||||||||||       |||
   CAUGU    GUAGCGCAUUAGCGAAACUUUUUUU       AGU                   A
CUU     AUUU                         CAUUCUA   GAUAAUUUUUUAAUUAAAA
Stem-loop sequence AUUGUACAACCGUCGCGUAAUCGUUUUGAAAAAAAUGAAUAAAAUAUAAAACUCACAUGAAAAAAAUUAAUUUUUUAAUAGUGAAUCUUACUUUUUUUCAAAGCGAUUACGCGAUGUUUAUGUACUUC