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BaseInfo

ncRNA ID	novel_jre_miR579
Species	Juglans regia
Class	miRNA
Genome position	NW_017443565.1:1050228-1050394 [-]
Reference genome	wgs.5d
Source	SRR1170960;SRR1168883
Length	23
Mature sequence(if miRNA)	1 - UUCACGACUGUAUAUAACAUUAC - 23
Stem-loop(if miRNA)	--    A  CU            -  UG   UC          CA   -      A    AAUAAAUAU   AC    -  A      AA   AAUG UA  UGUAGUUGUGAG UG  UAA  GUCGUGUAGU  CUU GAAAAA AGUG         GAG  UUAC AU AAAAGA  U   |||| ||  |||||||||||| ||  |||  ||||||||||  ||| |||||| ||||         |||  |||| || ||||||   UUAC AU  AUGUCAGCACUU AU  GUU  UAGUACGUCA  GAA CUUUUU UCAC         CUC  AGUG UA UUUUUU  A CA    A  AU            U  GU   UA          AC   A      C    ---------   -A    A  A      AA
Stem-loop sequence	AAUGAUACUUGUAGUUGUGAGUGUGUAAUCGUCGUGUAGUCACUUGAAAAAAAGUGAAUAAAUAUGAGACUUACAUAAAAAGAAAUAAAUUUUUUAAUAGUGAACUCCACUCUUUUUCAAAGCAACUGCAUGAUAUUUGUGUAUUUCACGACUGUAUAUAACAUUAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018974968.1	ncRNA:23   CAUUACAAUAUAUGUCAGCACUU   1   |||||||||*||||||||||||| targets:1088   GUAAUGUUACAUACAGUCGUGAA   1110 Target Full Sequence	1.0	PREDICTED: Juglans regia uncharacterized LOC108998416 (LOC108998416), mRNA	NA	coding protein	psRNATarget
XM_018956793.1	ncRNA:23   CAUUACAAUAUAUGUCAGCACUU   1   |*|||||||||||*||||||||| targets:1301   GGAAUGUUAUAUAAAGUCGUGAA   1323 Target Full Sequence	1.5	PREDICTED: Juglans regia probable long-chain-alcohol O-fatty-acyltransferase 5 (LOC108984746), mRNA	NA	coding protein	psRNATarget
XM_018983529.1	ncRNA:23   CAUUACAAUAUAUGUCAGCACUU   1   ||||||*||*||||||||||||| targets:2298   GUAAUGCUACAUACAGUCGUGAA   2320 Target Full Sequence	2.0	PREDICTED: Juglans regia UDP-sugar pyrophosphorylase-like (LOC109004826), mRNA	NA	coding protein	psRNATarget
XM_018981975.1	ncRNA:23   CAUUACAAUAUAUGUCAGCACUU   1   |||||||||*|||*||||||||| targets:1122   GUAAUGUUACAUAAAGUCGUGAA   1144 Target Full Sequence	2.5	PREDICTED: Juglans regia hydroxyphenylpyruvate reductase (LOC109003711), mRNA	NA	coding protein	psRNATarget