| ncRNA ID | novel_jre_miR571 |
| Species | Juglans regia |
| Class | miRNA |
| Genome position | NW_017442969.1:33446-33650 [-] |
| Reference genome | wgs.5d |
| Source | SRR1170960 |
| Length | 24 |
| Mature sequence(if miRNA) | 182 - AACAAGAAAUGUGGGACUUGAGCC - 205 |
| Stem-loop(if miRNA) |
-- A CA -- GAGGAUG G AUU - AGA ------A A GA AAC AGAAAUGUGGGACUUGAGCCGUGCCACCUA AUGGACAGGCCC GAC UCG GA UAAUG GGGGU UUGUG UACCCU UAU U ||| |||||||||||||||||||||||||||||| |||||||||||| ||| ||| || ||||| ||||| ||||| |||||| ||| A UUG UCUUUACACCCUGAACUCGGUACGGUGGAU UACCUGUCCGGG UUG AGU UU GUUAC CCCUA GAUAC AUGGGA AUA U GG A AC UU AAGAGGA G --C A --G GUGGUGG - AA |
| Stem-loop sequence | AACAAGAAAUGUGGGACUUGAGCCGUGCCACCUACAAUGGACAGGCCCGACGAGGAUGUCGGGAAUUUAAUGGGGGUAGAUUGUGAUACCCUAUAUGAUAUAAAUAAGGGUAGGUGGUGCAUAGGAUCCCACAUUGCUUGUGAAGGAGAAGUUUUGGGCCUGUCCAUCAUAGGUGGCAUGGCUCAAGUCCCACAUUUCUAGUUGG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_018984551.1 |
|
1.0 | PREDICTED: Juglans regia CSC1-like protein RXW8 (LOC109005553), mRNA | NA | coding protein | psRNATarget | |||||||||
| XM_018980430.1 |
|
1.5 | PREDICTED: Juglans regia cullin-3A-like (LOC109002603), transcript variant X2, mRNA | NA | coding protein | psRNATarget |