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BaseInfo

ncRNA ID	novel_jre_miR564
Species	Juglans regia
Class	miRNA
Genome position	NW_017389873.1:40599-40708 [+]
Reference genome	wgs.5d
Source	SRR1168796
Length	24
Mature sequence(if miRNA)	87 - UUUCAAAAUGAUUGCACGGCACUU - 110
Stem-loop(if miRNA)	--GCA          C          -------U    -  -U     -       UUAU      CCGUGCAAUU UUUUGAAAAA        AAUA GG  UUCAC UAAUAAA    U      |||||||||| ||||||||||        |||| ||  ||||| |||||||      GGCACGUUAG AAAACUUUUU        UUAU CC  GGGUG AUUAUUU    A UUCAC          U          UUACUCAU    G  UU     U       UUUA
Stem-loop sequence	GCACCGUGCAAUUCUUUUGAAAAAUAAUAGGUUUCACUAAUAAAUUAUUAAUUUUUUAUUAUGUGGGUUCCGUAUUUACUCAUUUUUUUCAAAAUGAUUGCACGGCACUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018969255.1	ncRNA:24   UUCACGGCACGUUAGUAAAACUUU   1   *||*||||||||=||||||||||| targets:1914   CAGCGCCGUGCAGUCAUUUUGAAA   1937 Target Full Sequence	1.5	PREDICTED: Juglans regia CTP synthase-like (LOC108994151), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018989745.1	ncRNA:24   UUCACGGCACGUUAGUAAAACUUU   1   |||||=|*|||||||||||||||| targets:1394   AAGUGUCAUGCAAUCAUUUUGAAA   1417 Target Full Sequence	2.0	PREDICTED: Juglans regia probable uridine nucleosidase 2 (LOC109009305), mRNA	NA	coding protein	psRNATarget