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BaseInfo

ncRNA ID	novel_jre_miR563
Species	Juglans regia
Class	miRNA
Genome position	NW_017437667.1:19203-19331 [+]
Reference genome	wgs.5d
Source	SRR1170960;SRR1168881;SRR1168883
Length	23
Mature sequence(if miRNA)	1 - GCGGUUGGGCCUGUUUGUUUGGA - 23
Stem-loop(if miRNA)	-----   GUU     U  - UG    G        -UUU      UGCU     AC    GAU     U      GCG   GGGCC GU U  UUUG AUGCCUCC    GCAACA    UGUGC  GGCG   GGUGU A      |||   ||||| || |  |||| ||||||||    ||||||    |||||  ||||   |||||      CGC   UCCGG CG A  AGGC UAUGGGGG    CGUUGU    ACACG  UCGU   CCACG U ACCUU   ---     U  U GU    A        CUCU      ---U     CA    GAC     G
Stem-loop sequence	GCGGUUGGGCCUGUUUGUUUGGAUGCCUCCUUUGCAACAUGCUUGUGCACGGCGGAUGGUGUUAUGGCACCCAGUGCUACGCACAUUGUUGCUCUCGGGGGUAUACGGAUGAUGCUGGCCUCGCUUCCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018959857.1	ncRNA:23   AGGUUUGUUUGUCCGGGUUGGCG   1   ***|||||=||*||||||||||| targets:1144   GGAAAACAGACUGGCCCAACCGC   1166 Target Full Sequence	2.5	PREDICTED: Juglans regia serine/threonine-protein phosphatase 7 long form homolog (LOC108987017), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_018959856.1	ncRNA:23   AGGUUUGUUUGUCCGGGUUGGCG   1   ***|||||=||*||||||||||| targets:1225   GGAAAACAGACUGGCCCAACCGC   1247 Target Full Sequence	2.5	PREDICTED: Juglans regia serine/threonine-protein phosphatase 7 long form homolog (LOC108987017), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_018959852.1	ncRNA:23   AGGUUUGUUUGUCCGGGUUGGCG   1   ***|||||=||*||||||||||| targets:1264   GGAAAACAGACUGGCCCAACCGC   1286 Target Full Sequence	2.5	PREDICTED: Juglans regia serine/threonine-protein phosphatase 7 long form homolog (LOC108987017), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018959853.1	ncRNA:23   AGGUUUGUUUGUCCGGGUUGGCG   1   ***|||||=||*||||||||||| targets:1268   GGAAAACAGACUGGCCCAACCGC   1290 Target Full Sequence	2.5	PREDICTED: Juglans regia serine/threonine-protein phosphatase 7 long form homolog (LOC108987017), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018959855.1	ncRNA:23   AGGUUUGUUUGUCCGGGUUGGCG   1   ***|||||=||*||||||||||| targets:1300   GGAAAACAGACUGGCCCAACCGC   1322 Target Full Sequence	2.5	PREDICTED: Juglans regia serine/threonine-protein phosphatase 7 long form homolog (LOC108987017), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_018959854.1	ncRNA:23   AGGUUUGUUUGUCCGGGUUGGCG   1   ***|||||=||*||||||||||| targets:1596   GGAAAACAGACUGGCCCAACCGC   1618 Target Full Sequence	2.5	PREDICTED: Juglans regia serine/threonine-protein phosphatase 7 long form homolog (LOC108987017), transcript variant X3, mRNA	NA	coding protein	psRNATarget