ncRNA ID | novel_jre_miR554 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017393195.1:1109-1232 [+] |
Reference genome | wgs.5d |
Source | SRR1170960;SRR1168880;SRR1170963;SRR1168886 |
Length | 24 |
Mature sequence(if miRNA) | 101 - AUGACUAUACGACACUUGCGCACU - 124 |
Stem-loop(if miRNA) |
--        C      C A               UAAAUAAAUACG   ----U   CAU      AA   UGUGUAAG GUCGUG A UCAUUUUGAAAAAAA            AGA     CUA   AAAAAU  A   |||||||| |||||| | |||||||||||||||            |||     |||   ||||||   ACGCGUUC CAGCAU U AGUAAAACUUUUUUU            UCU     GAU   UUUUUA  U UC        A      A C               ----------UA   UAAAU   AAU      AU |
Stem-loop sequence | UGUGUAAGCGUCGUGCAAUCAUUUUGAAAAAAAUAAAUAAAUACGAGAUCUACAUAAAAAUAAAUUAAUUUUUUAAUAGUAAAUUCUAUUUUUUUUCAAAAUGACUAUACGACACUUGCGCACU |