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BaseInfo

ncRNA ID novel_jre_miR554
Species Juglans regia
Class miRNA
Genome position NW_017393195.1:1109-1232 [+]
Reference genome wgs.5d
Source SRR1170960;SRR1168880;SRR1170963;SRR1168886
Length 24
Mature sequence(if miRNA) 101 - AUGACUAUACGACACUUGCGCACU - 124
Stem-loop(if miRNA) --        C      C A               UAAAUAAAUACG   ----U   CAU      AA
  UGUGUAAG GUCGUG A UCAUUUUGAAAAAAA            AGA     CUA   AAAAAU  A
  |||||||| |||||| | |||||||||||||||            |||     |||   ||||||
  ACGCGUUC CAGCAU U AGUAAAACUUUUUUU            UCU     GAU   UUUUUA  U
UC        A      A C               ----------UA   UAAAU   AAU      AU
Stem-loop sequence UGUGUAAGCGUCGUGCAAUCAUUUUGAAAAAAAUAAAUAAAUACGAGAUCUACAUAAAAAUAAAUUAAUUUUUUAAUAGUAAAUUCUAUUUUUUUUCAAAAUGACUAUACGACACUUGCGCACU