| ncRNA ID | novel_jre_miR550 |
| Species | Juglans regia |
| Class | miRNA |
| Genome position | NW_017390192.1:12116-12264 [+] |
| Reference genome | wgs.5d |
| Source | SRR1170960 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AGUUCCACACCCUGCACACCCACU - 24 |
| Stem-loop(if miRNA) |
-- C C C G U AUAUAAUAAAAA AUUCCAGA AGUUC ACACC UGCACACCCA UUAAAAAUAUGU AUUUUACU UUUUAUUC UG C ||||| ||||| |||||||||| |||||||||||| |||||||| |||||||| || A UCAGG UGUGG AUGUGUGGGU AAUUUUUAUACA UAAAAUGG AAAAUAGG UG U AU A A A A C ------AUAAAA AACGUUUG |
| Stem-loop sequence | AGUUCCACACCCUGCACACCCACUUAAAAAUAUGUGAUUUUACUUUUUUAUUCAUAUAAUAAAAAUGAUUCCAGACAUGUUUGCAAGUAAAAUAGGAUAAAACGGUAAAAUAACAUAUUUUUAAAUGGGUGUGUAAGGUGUAGGACUUA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_018965352.1 |
|
2.5 | PREDICTED: Juglans regia uncharacterized LOC108991188 (LOC108991188), mRNA | NA | coding protein | psRNATarget |