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BaseInfo

ncRNA ID novel_jre_miR549
Species Juglans regia
Class miRNA
Genome position NW_017389990.1:322841-323008 [+]
Reference genome wgs.5d
Source SRR1170960
Length 24
Mature sequence(if miRNA) 145 - AACAUUGUUGCUAAGGUUGGGUUG - 168
Stem-loop(if miRNA) --                 U                A                             AGG  CUUCACGUUGUGGC
  ACCCAACCUUAGCAACA UGUUGGUGUUGAUAAA UUGUGUGUGGAGCCACUAUCUACCAACAA   GA              U
  ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||   ||
  UGGGUUGGAAUCGUUGU ACAACCACAACUAUUU AACACAUACCUCGGUGAUAGAUGGUUGUU   UC              U
GU                 U                C                             --C  AAGGGAUGUUGAAG
Stem-loop sequence ACCCAACCUUAGCAACAUUGUUGGUGUUGAUAAAAUUGUGUGUGGAGCCACUAUCUACCAACAAAGGGACUUCACGUUGUGGCUUGAAGUUGUAGGGAACUCUUGUUGGUAGAUAGUGGCUCCAUACACAACUUUAUCAACACCAACAUUGUUGCUAAGGUUGGGUUG