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BaseInfo

ncRNA ID	novel_jre_miR547
Species	Juglans regia
Class	miRNA
Genome position	NW_017389863.1:64608-64700 [-]
Reference genome	wgs.5d
Source	SRR1170960
Length	21
Mature sequence(if miRNA)	1 - GGAAUCUUGAUGAUGCUGCAU - 21
Stem-loop(if miRNA)	--                  ACAAACUUCA   --  CGCUUUGUUCUCUCU   GCAGCAUCAUUAAGAUUC          AGG  GA               U   ||||||||||||||||||          |||  ||   CGUCGUAGUAGUUCUAAG          GUG  CU               A UA                  ---------G   UU  UUCUUUGGAAAGCUC
Stem-loop sequence	GCAGCAUCAUUAAGAUUCACAAACUUCAAGGGACGCUUUGUUCUCUCUUACUCGAAAGGUUUCUUUCUUGUGGGAAUCUUGAUGAUGCUGCAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018952291.1	ncRNA:21   UACGUCGUAGUAGUUCUAAGG   1   *|||||||||||||=|||||| targets:1463   CUGCAGCAUCAUCAGGAUUCC   1483 Target Full Sequence	1.5	PREDICTED: Juglans regia ethylene-responsive transcription factor RAP2-7-like (LOC108981197), mRNA	NA	coding protein	psRNATarget
XM_018958185.1	ncRNA:21   UACGUCGUAGUAGUUCUAAGG   1   *|||||||||||||=|||||| targets:1737   CUGCAGCAUCAUCAGGAUUCC   1757 Target Full Sequence	1.5	PREDICTED: Juglans regia floral homeotic protein APETALA 2-like (LOC108985763), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018958184.1	ncRNA:21   UACGUCGUAGUAGUUCUAAGG   1   *|||||||||||||=|||||| targets:1923   CUGCAGCAUCAUCAGGAUUCC   1943 Target Full Sequence	1.5	PREDICTED: Juglans regia floral homeotic protein APETALA 2-like (LOC108985763), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018989464.1	ncRNA:21   UACGUCGUAGUAGUUCUAAGG   1   *|||||||||||||=|||||| targets:1907   CUGCAGCAUCAUCAGGAUUCC   1927 Target Full Sequence	1.5	PREDICTED: Juglans regia floral homeotic protein APETALA 2 (LOC109009102), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018989462.1	ncRNA:21   UACGUCGUAGUAGUUCUAAGG   1   *|||||||||||||=|||||| targets:1910   CUGCAGCAUCAUCAGGAUUCC   1930 Target Full Sequence	1.5	PREDICTED: Juglans regia floral homeotic protein APETALA 2 (LOC109009102), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018989461.1	ncRNA:21   UACGUCGUAGUAGUUCUAAGG   1   *|||||||||||||=|||||| targets:1912   CUGCAGCAUCAUCAGGAUUCC   1932 Target Full Sequence	1.5	PREDICTED: Juglans regia floral homeotic protein APETALA 2 (LOC109009102), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018973255.1	ncRNA:21   UACGUCGUAGUAGUUCUAAGG   1   =|||||||||||||=|||||= targets:1592   GUGCAGCAUCAUCAGGAUUCU   1612 Target Full Sequence	2.5	PREDICTED: Juglans regia AP2-like ethylene-responsive transcription factor TOE3 (LOC108997119), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018973254.1	ncRNA:21   UACGUCGUAGUAGUUCUAAGG   1   =|||||||||||||=|||||= targets:1596   GUGCAGCAUCAUCAGGAUUCU   1616 Target Full Sequence	2.5	PREDICTED: Juglans regia AP2-like ethylene-responsive transcription factor TOE3 (LOC108997119), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018963352.1	ncRNA:21   UACGUCGUAGUAGUUCUAAGG   1   *|||||||||||||=|||||= targets:1713   CUGCAGCAUCAUCAGGAUUCU   1733 Target Full Sequence	2.5	PREDICTED: Juglans regia ethylene-responsive transcription factor RAP2-7 (LOC108989660), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_019005052.1	ncRNA:21   UACGUCGUAGUAGUUCUAAGG   1   *|||||||||||||=|||||= targets:1803   CUGCAGCAUCAUCAGGAUUCU   1823 Target Full Sequence	2.5	PREDICTED: Juglans regia ethylene-responsive transcription factor RAP2-7-like (LOC109022208), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018963351.1	ncRNA:21   UACGUCGUAGUAGUUCUAAGG   1   *|||||||||||||=|||||= targets:1741   CUGCAGCAUCAUCAGGAUUCU   1761 Target Full Sequence	2.5	PREDICTED: Juglans regia ethylene-responsive transcription factor RAP2-7 (LOC108989660), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_019005043.1	ncRNA:21   UACGUCGUAGUAGUUCUAAGG   1   *|||||||||||||=|||||= targets:1848   CUGCAGCAUCAUCAGGAUUCU   1868 Target Full Sequence	2.5	PREDICTED: Juglans regia ethylene-responsive transcription factor RAP2-7-like (LOC109022208), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018963354.1	ncRNA:21   UACGUCGUAGUAGUUCUAAGG   1   *|||||||||||||=|||||= targets:1793   CUGCAGCAUCAUCAGGAUUCU   1813 Target Full Sequence	2.5	PREDICTED: Juglans regia ethylene-responsive transcription factor RAP2-7 (LOC108989660), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_018963353.1	ncRNA:21   UACGUCGUAGUAGUUCUAAGG   1   *|||||||||||||=|||||= targets:1838   CUGCAGCAUCAUCAGGAUUCU   1858 Target Full Sequence	2.5	PREDICTED: Juglans regia ethylene-responsive transcription factor RAP2-7 (LOC108989660), transcript variant X3, mRNA	NA	coding protein	psRNATarget