ncRNA ID | novel_jre_miR544 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017389824.1:86715-86798 [-] |
Reference genome | wgs.5d |
Source | SRR1170960;SRR1170964 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGCUGAGUCUAACAUCUAAACACU - 24 |
Stem-loop(if miRNA) |
--     U   -     UC CA       C           AA   UGUUU GGU UUAGA  C  UUUGGAA UUGGACUGAAC  U   ||||| ||| |||||  |  ||||||| |||||||||||   ACAAA CUA AAUCU  G  GAAUUUU AAUCUGACUUG  U UC     U   C     GA UC       -           AC |
Stem-loop sequence | UGUUUUGGUUUAGAUCCCAUUUGGAACUUGGACUGAACAAUUCAGUUCAGUCUAAUUUUAAGCUGAGUCUAACAUCUAAACACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018960401.1 |
|
2.5 | PREDICTED: Juglans regia uncharacterized LOC108987475 (LOC108987475), mRNA | NA | coding protein | psRNATarget |