| ncRNA ID | novel_jre_miR543 |
| Species | Juglans regia |
| Class | miRNA |
| Genome position | NW_017389768.1:37736-37900 [-] |
| Reference genome | wgs.5d |
| Source | SRR1170960;SRR1168880;SRR1168883;SRR1168886 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AUUCCAUGACUGUACGUAACAUUA - 24 |
| Stem-loop(if miRNA) |
-- A U A UG - UG UA - A ---AUAAA GACCCACAUGAA AUG UAC UGCA U UG AGUGUGCAAG UUAUGCAGU UUUU AAAAA AGUGA UAUGG A ||| ||| |||| | || |||||||||| ||||||||| |||| ||||| ||||| ||||| UAC AUG AUGU A AC UUACACGUUU GGUAUGUCA GAAA UUUUU UCACU UAAUU A AU A C C GU C GU GC C C CCAGAUGA UUUUAAUUAAAG |
| Stem-loop sequence | AUGAUACUUGCAAUUGUGAGUGUGCAAGUGUUAUGCAGUUAUUUUAAAAAAAGUGAAUAAAUAUGGGACCCACAUGAAAAGAAAUUAAUUUUUUAAUAGUAGACCUCACUCUUUUUCAAAGCGACUGUAUGGUGUUUGCACAUUCCAUGACUGUACGUAACAUUA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_018969255.1 |
|
2.5 | PREDICTED: Juglans regia CTP synthase-like (LOC108994151), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
| XM_018995137.1 |
|
3.0 | PREDICTED: Juglans regia probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 (LOC109013151), transcript variant X1, mRNA | NA | coding protein | psRNATarget |