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BaseInfo

ncRNA ID novel_jre_miR538
Species Juglans regia
Class miRNA
Genome position NW_017389319.1:28412-28542 [+]
Reference genome wgs.5d
Source SRR1170960
Length 21
Mature sequence(if miRNA) 1 - UUUUUUACCAUCCUUUAUACA - 21
Stem-loop(if miRNA) --        C                         -      GC    U      -AUAAC   UA
  UUUUUUAC AUCCUUUAUACAACUAUGUUUUAAA UGAGGG  AUUU UGUAAA      UUA  A
  |||||||| ||||||||||||||||||||||||| ||||||  |||| ||||||      |||
  GAAAAAUG UAGGAAAUAUGUUGGUACAGAAUUU ACUCCC  UAAA ACAUUU      AAU  A
GG        U                         U      -A    U      CACUAC   UA
Stem-loop sequence UUUUUUACCAUCCUUUAUACAACUAUGUUUUAAAUGAGGGGCAUUUUUGUAAAAUAACUUAUAAAAUUAACAUCACUUUACAUAAAUACCCUCAUUUUAAGACAUGGUUGUAUAAAGGAUUGUAAAAAGGG