ncRNA ID | novel_jre_miR530 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017389568.1:448111-448204 [-] |
Reference genome | wgs.5d |
Source | SRR1170959 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AAUACCCCUCAUUUAACAUAU - 21 |
Stem-loop(if miRNA) |
--AUA                        U       --A      AA      UUAAAUGAGGGGUAUUAUUGUAAA UUAUUUU   UAAAAU  G      |||||||||||||||||||||||| |||||||   ||||||      AAUUUACUCCCCAUAAUAACAUUU AGUAGAA   AUUUUA  A UAUAC                        U       AAC      GU |
Stem-loop sequence | AUAUUAAAUGAGGGGUAUUAUUGUAAAUUUAUUUUAUAAAAUAAGAUGAUUUUACAAAAGAUGAUUUUACAAUAAUACCCCUCAUUUAACAUAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018956520.1 |
|
1.0 | PREDICTED: Juglans regia probable polygalacturonase At1g80170 (LOC108984532), mRNA | NA | coding protein | psRNATarget |