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BaseInfo

ncRNA ID novel_jre_miR530
Species Juglans regia
Class miRNA
Genome position NW_017389568.1:448111-448204 [-]
Reference genome wgs.5d
Source SRR1170959
Length 21
Mature sequence(if miRNA) 1 - AAUACCCCUCAUUUAACAUAU - 21
Stem-loop(if miRNA) --AUA                        U       --A      AA
     UUAAAUGAGGGGUAUUAUUGUAAA UUAUUUU   UAAAAU  G
     |||||||||||||||||||||||| |||||||   ||||||
     AAUUUACUCCCCAUAAUAACAUUU AGUAGAA   AUUUUA  A
UAUAC                        U       AAC      GU
Stem-loop sequence AUAUUAAAUGAGGGGUAUUAUUGUAAAUUUAUUUUAUAAAAUAAGAUGAUUUUACAAAAGAUGAUUUUACAAUAAUACCCCUCAUUUAACAUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018956520.1
ncRNA:21   UAUACAAUUUACUCCCCAUAA   1
  **||*||||||||||||||||
targets:1776   UCAUUUUAAAUGAGGGGUAUU   1796

1.0 PREDICTED: Juglans regia probable polygalacturonase At1g80170 (LOC108984532), mRNA NA coding protein psRNATarget