ncRNA ID | novel_jre_miR528 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017389360.1:343950-344063 [+] |
Reference genome | wgs.5d |
Source | SRR1170959 |
Length | 22 |
Mature sequence(if miRNA) | 1 - CAAGCGUCGCUCAAUCUUUAUG - 22 |
Stem-loop(if miRNA) |
--C         U     U  A       AU     GAUAC  AUC    --A       AU    AAGCGUCGC CAAUC UU UGAAAAA  GAAUA     AG   UCAC   UGAAAAA  U    ||||||||| ||||| || |||||||  |||||     ||   ||||   |||||||    UUCGCAGCG GUUAG AA AUUUUUU  CUUAU     UC   AGUG   AUUUUUU  U AUA         C     C  A       --     ----A  --A    AUA       AA |
Stem-loop sequence | CAAGCGUCGCUCAAUCUUUAUGAAAAAAUGAAUAGAUACAGAUCUCACAUGAAAAAAUUUAAUUUUUUAAUAGUGAACUAUAUUCUUUUUUAAAACGAUUGCGCGACGCUUAUA |