ncRNA ID | novel_jre_miR520 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017389159.1:1634663-1634857 [+] |
Reference genome | wgs.5d |
Source | SRR1170959 |
Length | 25 |
Mature sequence(if miRNA) | 1 - UUGUUGGUCGUGGUUUGUUACGUGG - 25 |
Stem-loop(if miRNA) |
--       UC   GU  G  -AC        ---------AUUUU ACAUUCUUUUUUUCUUCUGAACUUAUCAAAAAAAAAUAUUGAAGGUAUGCUAUGAC   UUGUUGG  GUG  UU UU   GUGGUGGG              G                                                        G   |||||||  |||  || ||   ||||||||              |   AGCAACC  CGC  AA AA   CGCCAUCU              A                                                        U CC       -C   UG  G  GCA        GCUACAAAUAACAU CAUUGAAUAGAUAGUAUAGUAGUCGUACGAGUAGUGUACUACGACGUAAACACCGU |
Stem-loop sequence | UUGUUGGUCGUGGUUUGUUACGUGGUGGGAUUUUGACAUUCUUUUUUUCUUCUGAACUUAUCAAAAAAAAAUAUUGAAGGUAUGCUAUGACGUUGCCACAAAUGCAGCAUCAUGUGAUGAGCAUGCUGAUGAUAUGAUAGAUAAGUUACAUACAAUAAACAUCGUCUACCGCACGAAGAAGUCGCCCCAACGACC |