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BaseInfo

ncRNA ID novel_jre_miR520
Species Juglans regia
Class miRNA
Genome position NW_017389159.1:1634663-1634857 [+]
Reference genome wgs.5d
Source SRR1170959
Length 25
Mature sequence(if miRNA) 1 - UUGUUGGUCGUGGUUUGUUACGUGG - 25
Stem-loop(if miRNA) --       UC   GU  G  -AC        ---------AUUUU ACAUUCUUUUUUUCUUCUGAACUUAUCAAAAAAAAAUAUUGAAGGUAUGCUAUGAC
  UUGUUGG  GUG  UU UU   GUGGUGGG              G                                                        G
  |||||||  |||  || ||   ||||||||              |
  AGCAACC  CGC  AA AA   CGCCAUCU              A                                                        U
CC       -C   UG  G  GCA        GCUACAAAUAACAU CAUUGAAUAGAUAGUAUAGUAGUCGUACGAGUAGUGUACUACGACGUAAACACCGU
Stem-loop sequence UUGUUGGUCGUGGUUUGUUACGUGGUGGGAUUUUGACAUUCUUUUUUUCUUCUGAACUUAUCAAAAAAAAAUAUUGAAGGUAUGCUAUGACGUUGCCACAAAUGCAGCAUCAUGUGAUGAGCAUGCUGAUGAUAUGAUAGAUAAGUUACAUACAAUAAACAUCGUCUACCGCACGAAGAAGUCGCCCCAACGACC