ncRNA ID | novel_jre_miR519 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017388929.1:35877-36011 [-] |
Reference genome | wgs.5d |
Source | SRR1170959 |
Length | 24 |
Mature sequence(if miRNA) | 112 - AAUAUGACUUAUAGGCUUUGGACA - 135 |
Stem-loop(if miRNA) |
--      -A  --          GGACA     AG      ---AACUU        CA       AACUUA   AAUAUG  CU  UAUAGGCUUU     CUUGA  GCUUUC        AUUUAAUU  UUUAAAC      U   ||||||  ||  ||||||||||     |||||  ||||||        ||||||||  |||||||   UUGUAC  GA  GUAUCCGGGG     GAAUU  CGAAGG        UGAGUUAA  AGAUUUG      U GG      GG  AC          -----     CA      GUAUUAUU        UG       AUUAUU |
Stem-loop sequence | AAUAUGACUUAUAGGCUUUGGACACUUGAAGGCUUUCAACUUAUUUAAUUCAUUUAAACAACUUAUUUUAUUAGUUUAGAGUAAUUGAGUUUAUUAUGGGAAGCACUUAAGGGGGCCUAUGCAAGGGCAUGUUGG |