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BaseInfo

ncRNA ID novel_jre_miR516
Species Juglans regia
Class miRNA
Genome position NW_017443608.1:475048-475139 [+]
Reference genome wgs.5d
Source SRR1170959
Length 20
Mature sequence(if miRNA) 1 - CUUUCAAACUCAAUGGCAUG - 20
Stem-loop(if miRNA) --       A        C           UG      C      U
  CUUUCAA CUCAAUGG AUGGAUUUUGC  AAUCAG ACUUAA G
  ||||||| |||||||| |||||||||||  |||||| ||||||
  GAAAGUU GGGUUACC UACCUAAAACG  UUAGUC UGAAUU C
AU       C        A           GU      U      U
Stem-loop sequence CUUUCAAACUCAAUGGCAUGGAUUUUGCUGAAUCAGCACUUAAUGCUUUAAGUUCUGAUUUGGCAAAAUCCAUACCAUUGGGCUUGAAAGUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_019002261.1
ncRNA:20   GUACGGUAACUCAAACUUUC   1
  *|||==*|||||||||||||
targets:1862   GAUGUUCUUGAGUUUGAAAG   1881

3.0 PREDICTED: Juglans regia probable protein S-acyltransferase 14 (LOC109019884), mRNA NA coding protein psRNATarget