ncRNA ID | novel_jre_miR516 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017443608.1:475048-475139 [+] |
Reference genome | wgs.5d |
Source | SRR1170959 |
Length | 20 |
Mature sequence(if miRNA) | 1 - CUUUCAAACUCAAUGGCAUG - 20 |
Stem-loop(if miRNA) |
--       A        C           UG      C      U   CUUUCAA CUCAAUGG AUGGAUUUUGC  AAUCAG ACUUAA G   ||||||| |||||||| |||||||||||  |||||| ||||||   GAAAGUU GGGUUACC UACCUAAAACG  UUAGUC UGAAUU C AU       C        A           GU      U      U |
Stem-loop sequence | CUUUCAAACUCAAUGGCAUGGAUUUUGCUGAAUCAGCACUUAAUGCUUUAAGUUCUGAUUUGGCAAAAUCCAUACCAUUGGGCUUGAAAGUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_019002261.1 |
|
3.0 | PREDICTED: Juglans regia probable protein S-acyltransferase 14 (LOC109019884), mRNA | NA | coding protein | psRNATarget |