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BaseInfo

ncRNA ID novel_jre_miR512
Species Juglans regia
Class miRNA
Genome position NW_017443516.1:1887942-1888084 [+]
Reference genome wgs.5d
Source SRR1170959
Length 23
Mature sequence(if miRNA) 1 - AGUCGUAGAAUGCGUAAGUACUG - 23
Stem-loop(if miRNA) --      A  A          C  UG     A    A     UAAUG    -----------    CAAU      U
  AGUCGU GA UGCGUAAGUA UG  CAAUU UUUU AAAAA     GAGU           CUAC    AAAAAA U
  |||||| || |||||||||| ||  ||||| |||| |||||     ||||           ||||    ||||||
  UUAGCA CU AUGUAUUCAU AC  GUUAA AAAA UUUUU     CUCA           GAUG    UUUUUU A
UG      A  C          A  GU     A    C     --UCA    UUUAUGCAUUG    UACU      G
Stem-loop sequence AGUCGUAGAAUGCGUAAGUACUGUGCAAUUAUUUUAAAAAAUAAUGGAGUCUACCAAUAAAAAAUUAGUUUUUUUCAUGUAGGUUACGUAUUUACUCACUUUUUUCAAAAAAAUUGUGCAAUACUUAUGUACUCAACGAUUGU