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BaseInfo

ncRNA ID novel_jre_miR502
Species Juglans regia
Class miRNA
Genome position NW_017442823.1:152795-152888 [-]
Reference genome wgs.5d
Source SRR1170959
Length 21
Mature sequence(if miRNA) 74 - CUCGUGCAGUCUCUUUGAACA - 94
Stem-loop(if miRNA) -C        U         C    A   AA      AC      U
  UCGUGCAG CUCUUUGAA AAAA UGG  CUCACC  AAAAAG G
  |||||||| ||||||||| |||| |||  ||||||  |||||| U
  GGUACGUC GGGAAACUU UUUU ACC  GGGUGG  UUUUUU A
GA        U         U    C   CC      AC      U
Stem-loop sequence CUCGUGCAGUCUCUUUGAACAAAAAUGGAACUCACCACAAAAAGUGUAUUUUUUUCAGGUGGGCCCCACUUUUUUUCAAAGGGUCUGCAUGGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018969250.1
ncRNA:21   ACAAGUUUCUCUGACGUGCUC   1
  *|||||*||||||||||*|||
targets:458   GGUUCACAGAGACUGCAAGAG   478

2.5 PREDICTED: Juglans regia 60S ribosomal protein L18-2-like (LOC108994149), mRNA NA coding protein psRNATarget