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BaseInfo

ncRNA ID novel_jre_miR500
Species Juglans regia
Class miRNA
Genome position NW_017442238.1:48803-48937 [+]
Reference genome wgs.5d
Source SRR1170959
Length 23
Mature sequence(if miRNA) 1 - AUACACCACACUACCAUCUCACU - 23
Stem-loop(if miRNA) --     C       C     C          C    AGUA                 C    ---U   A
  AUACA CACACUA CAUCU ACUUUUAUCC ACUA    AGGUGUGGCACAUUUAU ACUA    UGA U
  ||||| ||||||| ||||| |||||||||| ||||    ||||||||||||||||| ||||    |||
  UAUGU GUGUGAU GUAGA UGAAAAUAGG UGAU    UCUACACCGUGUAAGUA UGGU    ACU G
GA     U       A     A          A    ----                 A    UAUU   A
Stem-loop sequence AUACACCACACUACCAUCUCACUUUUAUCCCACUAAGUAAGGUGUGGCACAUUUAUCACUAUUGAAUGAUCAUUAUUGGUAAUGAAUGUGCCACAUCUUAGUAGGAUAAAAGUAAGAUGAUAGUGUGUUGUAUAG