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BaseInfo

ncRNA ID	novel_jre_miR495
Species	Juglans regia
Class	miRNA
Genome position	NW_017439344.1:140-283 [+]
Reference genome	wgs.5d
Source	SRR1170959
Length	24
Mature sequence(if miRNA)	121 - GACGGUUACGCAAUUCACGGUGGU - 144
Stem-loop(if miRNA)	--A        G                     C           ----------  A        U  U      U    ACCGUGAA UGCGUAACUGUCGCGUAAUUG UUUGAAAAAGA          GU GGGUUUAC AU AAAAAA U    |||||||| ||||||||||||||||||||| |||||||||||          || |||||||| || |||||| A    UGGCACUU ACGCAUUGGCAGCGCAUUAGC AAACUUUUUUU          UA CCUAGGUG UA UUUUUU A UGG        A                     A           AUUUAUUUUA  C        -  C      U
Stem-loop sequence	AACCGUGAAGUGCGUAACUGUCGCGUAAUUGCUUUGAAAAAGAGUAGGGUUUACUAUUAAAAAAUUAAUUUUUUUCAUGUGGAUCCCAUAUUUUAUUUAUUUUUUUCAAAACGAUUACGCGACGGUUACGCAAUUCACGGUGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018951169.1	ncRNA:24   UGGUGGCACUUAACGCAUUGGCAG   1   ||*||=|||||||||||||||||| targets:3925   ACAACUGUGAAUUGCGUAACCGUC   3948 Target Full Sequence	1.0	PREDICTED: Juglans regia protein NLP9 (LOC108980290), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018951165.1	ncRNA:24   UGGUGGCACUUAACGCAUUGGCAG   1   ||*||=|||||||||||||||||| targets:4214   ACAACUGUGAAUUGCGUAACCGUC   4237 Target Full Sequence	1.0	PREDICTED: Juglans regia protein NLP9 (LOC108980290), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018951175.1	ncRNA:24   UGGUGGCACUUAACGCAUUGGCAG   1   ||*||=|||||||||||||||||| targets:4297   ACAACUGUGAAUUGCGUAACCGUC   4320 Target Full Sequence	1.0	PREDICTED: Juglans regia protein NLP9 (LOC108980290), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_018951157.1	ncRNA:24   UGGUGGCACUUAACGCAUUGGCAG   1   ||*||=|||||||||||||||||| targets:4307   ACAACUGUGAAUUGCGUAACCGUC   4330 Target Full Sequence	1.0	PREDICTED: Juglans regia protein NLP9 (LOC108980290), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018987355.1	ncRNA:24   UGGUGGCACUUAACGCAUUGGCAG   1   ||*|||||||||||||||||||*| targets:1831   ACAACCGUGAAUUGCGUAACCGCC   1854 Target Full Sequence	1.5	PREDICTED: Juglans regia 7-deoxyloganetin glucosyltransferase-like (LOC109007610), mRNA	NA	coding protein	psRNATarget