ncRNA ID | novel_jre_miR487 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017389973.1:383797-383936 [+] |
Reference genome | wgs.5d |
Source | SRR1170959 |
Length | 22 |
Mature sequence(if miRNA) | 119 - ACAUUUACGCACUUCACGGUUG - 140 |
Stem-loop(if miRNA) |
--    C   U       C  C   A      C       -  --AUAUAAUAAAAC   AAAUCCAUAUG   ACUG GAA UGUGUAA UG CAC UAAUCG UUUGAAA GA              AUG           A   |||| ||| ||||||| || ||| |||||| ||||||| ||              |||           A   UGGC CUU ACGCAUU AC GUG AUUAGC AAACUUU CU              AUU           A GU    A   C       U  A   C      U       U  CACUUCAAAUGAUA   UUUUAAUUAAA |
Stem-loop sequence | ACUGCGAAUUGUGUAACUGCCACAUAAUCGCUUUGAAAGAAUAUAAUAAAACAUGAAAUCCAUAUGAAAAAAUUAAUUUUUUAAUAGUAAACUUCACUCUUUUCAAAUCGAUUACGUGACAUUUACGCACUUCACGGUUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018987202.1 |
|
2.5 | PREDICTED: Juglans regia NAC domain-containing protein 91-like (LOC109007516), mRNA | NA | coding protein | psRNATarget |