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BaseInfo

ncRNA ID novel_jre_miR487
Species Juglans regia
Class miRNA
Genome position NW_017389973.1:383797-383936 [+]
Reference genome wgs.5d
Source SRR1170959
Length 22
Mature sequence(if miRNA) 119 - ACAUUUACGCACUUCACGGUUG - 140
Stem-loop(if miRNA) --    C   U       C  C   A      C       -  --AUAUAAUAAAAC   AAAUCCAUAUG
  ACUG GAA UGUGUAA UG CAC UAAUCG UUUGAAA GA              AUG           A
  |||| ||| ||||||| || ||| |||||| ||||||| ||              |||           A
  UGGC CUU ACGCAUU AC GUG AUUAGC AAACUUU CU              AUU           A
GU    A   C       U  A   C      U       U  CACUUCAAAUGAUA   UUUUAAUUAAA
Stem-loop sequence ACUGCGAAUUGUGUAACUGCCACAUAAUCGCUUUGAAAGAAUAUAAUAAAACAUGAAAUCCAUAUGAAAAAAUUAAUUUUUUAAUAGUAAACUUCACUCUUUUCAAAUCGAUUACGUGACAUUUACGCACUUCACGGUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018987202.1
ncRNA:22   GUUGGCACUUCACGCAUUUACA   1
  ||||||||||||||||||*||*
targets:1820   CAACCGUGAAGUGCGUAACUGC   1841

2.5 PREDICTED: Juglans regia NAC domain-containing protein 91-like (LOC109007516), mRNA NA coding protein psRNATarget