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BaseInfo

ncRNA ID	novel_jre_miR486
Species	Juglans regia
Class	miRNA
Genome position	NW_017388734.1:52719-52884 [+]
Reference genome	wgs.5d
Source	SRR1170959
Length	23
Mature sequence(if miRNA)	1 - CUUGAGGAGAUGUGUGGUCUAGA - 23
Stem-loop(if miRNA)	--                                                           UCAU   U  AAAAUGGAUGAAA   CUUGAGGAGAUGUGUGGUCUAGAUGAUGCCACAUCAUGUGUGUAAAAUGGAUGCUCCCA    GUG GC             U   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||| ||   GAACUCCUCUACACACCAGAUCUACUACGGUGUAGUACACACGUUUUACCUACGAGGGU    CAC CG             A GU                                                           -UAC   -  AAGAUAGAUAUAA
Stem-loop sequence	CUUGAGGAGAUGUGUGGUCUAGAUGAUGCCACAUCAUGUGUGUAAAAUGGAUGCUCCCAUCAUGUGUGCAAAAUGGAUGAAAUAAAUAUAGAUAGAAGCCACCAUUGGGAGCAUCCAUUUUGCACACAUGAUGUGGCAUCAUCUAGACCACACAUCUCCUCAAGUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018994075.1	ncRNA:23   AGAUCUGGUGUGUAGAGGAGUUC   1   ||||||||||||||||||*|||| targets:2339   UCUAGACCACACAUCUCCCCAAG   2361 Target Full Sequence	1.5	PREDICTED: Juglans regia mitogen-activated protein kinase kinase kinase 1-like (LOC109012440), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018994073.1	ncRNA:23   AGAUCUGGUGUGUAGAGGAGUUC   1   ||||||||||||||||||*|||| targets:2477   UCUAGACCACACAUCUCCCCAAG   2499 Target Full Sequence	1.5	PREDICTED: Juglans regia mitogen-activated protein kinase kinase kinase 1-like (LOC109012440), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018994072.1	ncRNA:23   AGAUCUGGUGUGUAGAGGAGUUC   1   ||||||||||||||||||*|||| targets:2479   UCUAGACCACACAUCUCCCCAAG   2501 Target Full Sequence	1.5	PREDICTED: Juglans regia mitogen-activated protein kinase kinase kinase 1-like (LOC109012440), transcript variant X1, mRNA	NA	coding protein	psRNATarget