Search result

BaseInfo

ncRNA ID	novel_jre_miR480
Species	Juglans regia
Class	miRNA
Genome position	NW_017389777.1:281714-281797 [-]
Reference genome	wgs.5d
Source	SRR1170958
Length	19
Mature sequence(if miRNA)	1 - UUGAGCCGCGUCAAUAUCU - 19
Stem-loop(if miRNA)	--           U       U   -G          AAAGG   GUAUUGGCGCG CUCAAUU GAA  ACAUGGUUAA     A   ||||||||||| ||||||| |||  ||||||||||     U   UAUAACUGCGC GAGUUAG UUU  UGUACCGAUU     A UC           C       U   AG          AAAAG
Stem-loop sequence	GUAUUGGCGCGUCUCAAUUUGAAGACAUGGUUAAAAAGGAUAGAAAAUUAGCCAUGUGAUUUUGAUUGAGCCGCGUCAAUAUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018964800.1	ncRNA:19   UCUAUAACUGCGCCGAGUU   1   =|||||||=|||||||||| targets:1736   GGAUAUUGGCGCGGCUCAA   1754 Target Full Sequence	2.5	PREDICTED: Juglans regia scarecrow-like protein 27 (LOC108990734), mRNA	NA	coding protein	psRNATarget
XM_018998274.1	ncRNA:19   UCUAUAACUGCGCCGAGUU   1   =|||||||=|||||||||| targets:1738   GGAUAUUGGCGCGGCUCAA   1756 Target Full Sequence	2.5	PREDICTED: Juglans regia scarecrow-like protein 22 (LOC109015811), mRNA	NA	coding protein	psRNATarget
XM_018992874.1	ncRNA:19   UCUAUAACUGCGCCGAGUU   1   =|||||||=|||||||||| targets:1967   GGAUAUUGGCGCGGCUCAA   1985 Target Full Sequence	2.5	PREDICTED: Juglans regia scarecrow-like protein 22 (LOC109011601), mRNA	NA	coding protein	psRNATarget