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BaseInfo

ncRNA ID novel_jre_miR474
Species Juglans regia
Class miRNA
Genome position NW_017443621.1:1340136-1340275 [+]
Reference genome wgs.5d
Source SRR1170958;SRR1170959;SRR1170961;SRR1170962;SRR1170965;SRR1170968;SRR1168880;SRR1170969;SRR1168881;SRR1168883;SRR1168886
Length 21
Mature sequence(if miRNA) 1 - GGGCGUCUCUUCCUUUGCAAG - 21
Stem-loop(if miRNA) --     U         U      G G  -C    -U             A               C    A
  GGGCG CUCUUCCUU GCAAGU G GA  UGAU  GAGCUAUAUAUAA UAUAUAUAUAUAUAU AUGU U
  ||||| ||||||||| |||||| | ||  ||||  ||||||||||||| ||||||||||||||| ||||
  CCCGU GAGAGGGAA CGUUCA U CU  AUUA  CUCGAUAUAUAUU AUAUAUAUAUAUAUA UAUA A
GU     U         C      G A  AC    CU             -               -    U
Stem-loop sequence GGGCGUCUCUUCCUUUGCAAGUGGGGACUGAUUGAGCUAUAUAUAAAUAUAUAUAUAUAUAUCAUGUAUAUAUAUAUAUAUAUAUAUAUAUUAUAUAUAGCUCUCAUUACAUCAUGACUUGCCAAGGGAGAGUUGCCCUG