Search result

BaseInfo

ncRNA ID	novel_jre_miR469
Species	Juglans regia
Class	miRNA
Genome position	NW_017388925.1:391896-392063 [-]
Reference genome	wgs.5d
Source	SRR1170958
Length	24
Mature sequence(if miRNA)	1 - AGAUGGUAGUAUGAUGUAUAGAAU - 24
Stem-loop(if miRNA)	--G              CA    C      G  CA         GU                 U             AGAAUCA    UUAUAUAUUAUACU  CAUC UAUUUU AU  UACUAAGUG  AUGUGACAUAUUUAUUA CAUUAAAUGAUAA       U    ||||||||||||||  |||| |||||| ||  |||||||||  ||||||||||||||||| |||||||||||||    GAUAUGUAGUAUGA  GUAG AUAAAA UA  GUGAUUUAU  UACACUGUGUAAAUAGU GUAAUUUACUAUU       G UAA              UG    A      G  AG         AC                 U             AAAUAAU
Stem-loop sequence	GUUAUAUAUUAUACUCACAUCCUAUUUUGAUCAUACUAAGUGGUAUGUGACAUAUUUAUUAUCAUUAAAUGAUAAAGAAUCAUGUAAUAAAUUAUCAUUUAAUGUUGAUAAAUGUGUCACAUCAUAUUUAGUGGAAUGAAAAUAAGAUGGUAGUAUGAUGUAUAGAAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_019004127.1	ncRNA:24   UAAGAUAUGUAGUAUGAUGGUAGA   1   ||||||||=|*||||||||||||| targets:1080   AUUCUAUAUACCAUACUACCAUCU   1103 Target Full Sequence	2.0	PREDICTED: Juglans regia expansin-A8-like (LOC109021491), mRNA	NA	coding protein	psRNATarget