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BaseInfo

ncRNA ID novel_jre_miR468
Species Juglans regia
Class miRNA
Genome position NW_017443485.1:523270-523369 [+]
Reference genome wgs.5d
Source SRR1170958
Length 22
Mature sequence(if miRNA) 1 - UUCACCUCUUCUGUCAAAUAUG - 22
Stem-loop(if miRNA) --UUC     UU                           A      CUCCA
     ACCUC  CUGUCAAAUAUGCCACCACUUUUUUCA GUUAUC     A
     |||||  ||||||||||||||||||||||||||| ||||||
     UGGAG  GACAGUUUGUACGGUGGUGAAAAAAGU CAAUAG     U
UAAAC     --                           C      CAAUU
Stem-loop sequence UUCACCUCUUCUGUCAAAUAUGCCACCACUUUUUUCAAGUUAUCCUCCAAUUUAACGAUAACCUGAAAAAAGUGGUGGCAUGUUUGACAGGAGGUCAAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018988101.1
ncRNA:22   GUAUAAACUGUCUUCUCCACUU   1
  |||=|||||||||||||||*||
targets:727   CAUGUUUGACAGAAGAGGUCAA   748

2.5 PREDICTED: Juglans regia putative disease resistance protein At1g50180 (LOC109008119), mRNA NA coding protein psRNATarget