ncRNA ID | novel_jre_miR468 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017443485.1:523270-523369 [+] |
Reference genome | wgs.5d |
Source | SRR1170958 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UUCACCUCUUCUGUCAAAUAUG - 22 |
Stem-loop(if miRNA) |
--UUC     UU                           A      CUCCA      ACCUC  CUGUCAAAUAUGCCACCACUUUUUUCA GUUAUC     A      |||||  ||||||||||||||||||||||||||| ||||||      UGGAG  GACAGUUUGUACGGUGGUGAAAAAAGU CAAUAG     U UAAAC     --                           C      CAAUU |
Stem-loop sequence | UUCACCUCUUCUGUCAAAUAUGCCACCACUUUUUUCAAGUUAUCCUCCAAUUUAACGAUAACCUGAAAAAAGUGGUGGCAUGUUUGACAGGAGGUCAAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018988101.1 |
|
2.5 | PREDICTED: Juglans regia putative disease resistance protein At1g50180 (LOC109008119), mRNA | NA | coding protein | psRNATarget |