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BaseInfo

ncRNA ID	novel_jre_miR467
Species	Juglans regia
Class	miRNA
Genome position	NW_017443610.1:1316701-1316827 [+]
Reference genome	wgs.5d
Source	SRR1168796
Length	22
Mature sequence(if miRNA)	1 - UUUCCCUUCUUUUUUUUUUUUU - 22
Stem-loop(if miRNA)	-    CC       UU     UU      ----------AUAAA      GAUAACUAGUAAUGGCAU  UUUC  UUCUUUU  UUUUU  UUUUUU               AAAAAU                  U  ||||  |||||||  |||||  ||||||               ||||||                  U  AAAG  AAGAAAG  AGAAA  AAAAAA               GAGUCU                  U U    -C       GU     UU      CAACAAUCUCACUUU      CGUAAAGUAGACUCUUCU
Stem-loop sequence	UUUCCCUUCUUUUUUUUUUUUUUUUUUUAUAAAAAAAAUGAUAACUAGUAAUGGCAUUUUUCUUCUCAGAUGAAAUGCUCUGAGUUUCACUCUAACAACAAAAAAUUAAAGAUGGAAAGAACGAAAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018957106.1	ncRNA:22   UU--UUUUUUUUUUUCUUCCCUUU   1   ||--|*|||||||||||||||||| targets:3   AAUUAUAAAAAAAAAGAAGGGAAA   26 Target Full Sequence	1.0	PREDICTED: Juglans regia uncharacterized LOC108984987 (LOC108984987), partial mRNA	NA	coding protein	psRNATarget
XM_018990737.1	ncRNA:22   UUUUUUUUUUUUUCUUCCCUUU   1   ||||||||||||||||*||||| targets:90   AAAAAAAAAAAAAGAAAGGAAA   111 Target Full Sequence	1.5	PREDICTED: Juglans regia zinc transport protein ZntB-like (LOC109010034), mRNA	NA	coding protein	psRNATarget
XM_018963127.1	ncRNA:22   UUUUUUUUUUUUUCUUCCCUUU   1   |||||||||||||*|||||||| targets:1665   AAAAAAAAAAAAAAAAGGGAAA   1686 Target Full Sequence	1.5	PREDICTED: Juglans regia histone-lysine N-methyltransferase ASHR3 (LOC108989501), mRNA	NA	coding protein	psRNATarget
XM_018988548.1	ncRNA:22   UUUUUUUUUUUUUCUUCCCUUU   1   |||||||||||||||||*|||| targets:596   AAAAAAAAAAAAAGAAGAGAAA   617 Target Full Sequence	1.5	PREDICTED: Juglans regia RPM1-interacting protein 4-like (LOC109008453), mRNA	NA	coding protein	psRNATarget
XM_018955294.1	ncRNA:22   UUUUUUUUUUUUUCUUCCCUUU   1   ||||||||==|||||||||||| targets:34   AAAAAAAAGGAAAGAAGGGAAA   55 Target Full Sequence	2.5	PREDICTED: Juglans regia F-box protein At5g49610 (LOC108983589), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018955288.1	ncRNA:22   UUUUUUUUUUUUUCUUCCCUUU   1   ||||||||==|||||||||||| targets:34   AAAAAAAAGGAAAGAAGGGAAA   55 Target Full Sequence	2.5	PREDICTED: Juglans regia F-box protein At5g49610 (LOC108983589), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018996776.1	ncRNA:22   UUUUUUUUUUUUUCUUCCCUUU   1   ||=||||=||=||||||||||| targets:634   AAGAAAAGAAGAAGAAGGGAAA   655 Target Full Sequence	2.5	PREDICTED: Juglans regia protein IQ-DOMAIN 14 (LOC109014348), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018996778.1	ncRNA:22   UUUUUUUUUUUUUCUUCCCUUU   1   ||=||||=||=||||||||||| targets:625   AAGAAAAGAAGAAGAAGGGAAA   646 Target Full Sequence	2.5	PREDICTED: Juglans regia protein IQ-DOMAIN 14 (LOC109014348), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_018996777.1	ncRNA:22   UUUUUUUUUUUUUCUUCCCUUU   1   ||=||||=||=||||||||||| targets:607   AAGAAAAGAAGAAGAAGGGAAA   628 Target Full Sequence	2.5	PREDICTED: Juglans regia protein IQ-DOMAIN 14 (LOC109014348), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018996775.1	ncRNA:22   UUUUUUUUUUUUUCUUCCCUUU   1   ||=||||=||=||||||||||| targets:598   AAGAAAAGAAGAAGAAGGGAAA   619 Target Full Sequence	2.5	PREDICTED: Juglans regia protein IQ-DOMAIN 14 (LOC109014348), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018956476.1	ncRNA:22   UUUUUUUUUUUUUCUUCCCUUU   1   ||=||=|||=|||||||||||| targets:185   AAGAAGAAAGAAAGAAGGGAAA   206 Target Full Sequence	2.5	PREDICTED: Juglans regia uncharacterized LOC108984494 (LOC108984494), mRNA	NA	coding protein	psRNATarget
XM_018982202.1	ncRNA:22   UUUUUUUUUUUUUCUUCCCUUU   1   *||||||=||=||||||||||| targets:872   CAAAAAAGAAGAAGAAGGGAAA   893 Target Full Sequence	2.5	PREDICTED: Juglans regia homeobox protein knotted-1-like 6 (LOC109003871), mRNA	NA	coding protein	psRNATarget
XM_018976737.1	ncRNA:22   UUUUUUUUUUUUUCUUCCCUUU   1   ||||||=|||||||||||*||| targets:2554   AAAAAAGAAAAAAGAAGGAAAA   2575 Target Full Sequence	2.5	PREDICTED: Juglans regia uncharacterized LOC108999844 (LOC108999844), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018970890.1	ncRNA:22   UUUUUUUUUUUUUCUUCCCUUU   1   |||||||||||||||||*|||= targets:2154   AAAAAAAAAAAAAGAAGAGAAG   2175 Target Full Sequence	2.5	PREDICTED: Juglans regia acidic leucine-rich nuclear phosphoprotein 32-related protein-like (LOC108995340), mRNA	NA	coding protein	psRNATarget
XM_018984389.1	ncRNA:22   UUUUUUUUUUUUUCUUCCCUUU   1   |||||||||||||||||*|||= targets:175   AAAAAAAAAAAAAGAAGAGAAG   196 Target Full Sequence	2.5	PREDICTED: Juglans regia probable aquaporin SIP2-1 (LOC109005443), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_019000815.1	ncRNA:22   UUUUUUUUUUUUUCUUCCCUUU   1   |||||||||||||*|||||||* targets:1446   AAAAAAAAAAAAAAAAGGGAAU   1467 Target Full Sequence	2.5	PREDICTED: Juglans regia transcription factor-like protein DPA (LOC109018675), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_019000818.1	ncRNA:22   UUUUUUUUUUUUUCUUCCCUUU   1   |||||||||||||*|||||||* targets:1374   AAAAAAAAAAAAAAAAGGGAAU   1395 Target Full Sequence	2.5	PREDICTED: Juglans regia transcription factor-like protein DPA (LOC109018675), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_019000814.1	ncRNA:22   UUUUUUUUUUUUUCUUCCCUUU   1   |||||||||||||*|||||||* targets:1203   AAAAAAAAAAAAAAAAGGGAAU   1224 Target Full Sequence	2.5	PREDICTED: Juglans regia transcription factor-like protein DPA (LOC109018675), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_019000817.1	ncRNA:22   UUUUUUUUUUUUUCUUCCCUUU   1   |||||||||||||*|||||||* targets:1135   AAAAAAAAAAAAAAAAGGGAAU   1156 Target Full Sequence	2.5	PREDICTED: Juglans regia transcription factor-like protein DPA (LOC109018675), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_019000816.1	ncRNA:22   UUUUUUUUUUUUUCUUCCCUUU   1   |||||||||||||*|||||||* targets:1131   AAAAAAAAAAAAAAAAGGGAAU   1152 Target Full Sequence	2.5	PREDICTED: Juglans regia transcription factor-like protein DPA (LOC109018675), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018999743.1	ncRNA:22   UUUUUUUUUUUUUCUUCCCUUU   1   |||||||||||||*|||||||* targets:581   AAAAAAAAAAAAAAAAGGGAAU   602 Target Full Sequence	2.5	PREDICTED: Juglans regia transcription factor-like protein DPA (LOC109017484), partial mRNA	NA	coding protein	psRNATarget
XM_018955999.1	ncRNA:22   UUUUUUUUUUUUUCUUCCCUUU   1   =|||||||=||||||||*|||| targets:30   GAAAAAAAGAAAAGAAGAGAAA   51 Target Full Sequence	2.5	PREDICTED: Juglans regia uncharacterized LOC108984146 (LOC108984146), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018955998.1	ncRNA:22   UUUUUUUUUUUUUCUUCCCUUU   1   =|||||||=||||||||*|||| targets:29   GAAAAAAAGAAAAGAAGAGAAA   50 Target Full Sequence	2.5	PREDICTED: Juglans regia uncharacterized LOC108984146 (LOC108984146), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018956000.1	ncRNA:22   UUUUUUUUUUUUUCUUCCCUUU   1   =|||||||=||||||||*|||| targets:30   GAAAAAAAGAAAAGAAGAGAAA   51 Target Full Sequence	2.5	PREDICTED: Juglans regia uncharacterized LOC108984146 (LOC108984146), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018967623.1	ncRNA:22   UUUUUUUUUUUUUCUUCCCUUU   1   |=|||||||||||||||*|||= targets:1398   AGAAAAAAAAAAAGAAGCGAAG   1419 Target Full Sequence	2.5	PREDICTED: Juglans regia protein DETOXIFICATION 31-like (LOC108992904), mRNA	NA	coding protein	psRNATarget
XM_018991719.1	ncRNA:22   UUUUUUUUUUUUUCUUCCCUUU   1   ||=||||||||||||||*|||* targets:328   AAGAAAAAAAAAAGAAGAGAAU   349 Target Full Sequence	2.5	PREDICTED: Juglans regia calcium-transporting ATPase 10, plasma membrane-type-like (LOC109010801), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_018957682.1	ncRNA:22   UUUUUUUUUUUUUCUUCCCUUU   1   *|==||||=||||||||||||= targets:2381   UAGGAAAAGAAAAGAAGGGAAG   2402 Target Full Sequence	3.0	PREDICTED: Juglans regia protein ENDOSPERM DEFECTIVE 1-like (LOC108985396), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018957683.1	ncRNA:22   UUUUUUUUUUUUUCUUCCCUUU   1   *|==||||=||||||||||||= targets:2303   UAGGAAAAGAAAAGAAGGGAAG   2324 Target Full Sequence	3.0	PREDICTED: Juglans regia protein ENDOSPERM DEFECTIVE 1-like (LOC108985396), transcript variant X2, mRNA	NA	coding protein	psRNATarget