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BaseInfo

ncRNA ID	novel_jre_miR464
Species	Juglans regia
Class	miRNA
Genome position	NW_017442855.1:26622-26790 [+]
Reference genome	wgs.5d
Source	SRR1168795
Length	24
Mature sequence(if miRNA)	146 - UUUACGACUGUAUGUAGCAUUACU - 169
Stem-loop(if miRNA)	--A    A                -UA  C   C C         A          AAUAAAUAAAUAUAAAACCCA AUGAAAAGAAAUUAA    AAUG UAUAUGCAGUUGUGAG   UG AAA G CGUGCAGUC CUUUAAAAAA                     U               U    |||| ||||||||||||||||   || ||| | ||||||||| ||||||||||                     |               U    UUAC AUGUAUGUCAGCAUUU   AC UUU C GUAUGUCAG GAAAUUUUUU                     C               U UCA    G                UAC  A   A A         C          -----------------CUCA UUCAGAUGAUAAUUU
Stem-loop sequence	AAAUGAUAUAUGCAGUUGUGAGUAUGCAAACGCCGUGCAGUCACUUUAAAAAAAAUAAAUAAAUAUAAAACCCAUAUGAAAAGAAAUUAAUUUUUUAAUAGUAGACUUCACUCUUUUUUAAAGCGACUGUAUGACAUUUACACAUUUUACGACUGUAUGUAGCAUUACU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018983529.1	ncRNA:24   UCAUUACGAUGUAUGUCAGCAUUU   1   |||||||||||||||||||||=|| targets:2297   AGUAAUGCUACAUACAGUCGUGAA   2320 Target Full Sequence	1.5	PREDICTED: Juglans regia UDP-sugar pyrophosphorylase-like (LOC109004826), mRNA	NA	coding protein	psRNATarget
XM_018974968.1	ncRNA:24   UCAUUACGAUGUAUGUCAGCAUUU   1   |||||||=|||||||||||||=|| targets:1087   AGUAAUGUUACAUACAGUCGUGAA   1110 Target Full Sequence	2.5	PREDICTED: Juglans regia uncharacterized LOC108998416 (LOC108998416), mRNA	NA	coding protein	psRNATarget
XM_018998000.1	ncRNA:24   UCAUUACGAUGUAUGUCAGCAUUU   1   |*|||||=||||||*||||||||| targets:671   AAUAAUGUUACAUAAAGUCGUAAA   694 Target Full Sequence	2.5	PREDICTED: Juglans regia hydroxyphenylpyruvate reductase-like (LOC109015528), partial mRNA	NA	coding protein	psRNATarget
XM_018995644.1	ncRNA:24   UCAUUACG--AUGUAUGUCAGCAUUU   1   =|*=||||--|||||||||||||||| targets:772   GGGGAUGCAGUACAUACAGUCGUAAA   797 Target Full Sequence	2.5	PREDICTED: Juglans regia uncharacterized LOC109013523 (LOC109013523), transcript variant X1, mRNA	NA	coding protein	psRNATarget