ncRNA ID | novel_jre_miR460 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017393213.1:12660-12861 [-] |
Reference genome | wgs.5d |
Source | SRR1170958;SRR1170969;SRR1170970;SRR1168795 |
Length | 24 |
Mature sequence(if miRNA) | 179 - GAAGAGAUAUGCUUAGCCAAAUGG - 202 |
Stem-loop(if miRNA) |
--G     A             A       A  C            A                              A    -UGAAUAG   CAAUACUU    AAGAG UAUGCUUAGCCAA UGGUUAG CA UUCUCUUGGUGA GGGAGGGCAUUGGUUCGAGUCUCCUCAAUU UACU        GUG        C    ||||| ||||||||||||| ||||||| || |||||||||||| |||||||||||||||||||||||||||||| ||||        |||        A    UUCUC GUACGGAUCGGUU ACCAAUC GU GAGGGAACUACU CCCUCCUGUAACCAAGUUCAGGGGAGUUGA AUGA        CAC        A UGG     C             A       C  U            A                              C    UGAAAAAA   UAAAUUAA |
Stem-loop sequence | GAAGAGAUAUGCUUAGCCAAAUGGUUAGACACUUCUCUUGGUGAAGGGAGGGCAUUGGUUCGAGUCUCCUCAAUUAUACUUGAAUAGGUGCAAUACUUCAAAAUUAAAUCACAAAAAAGUAGUACAGUUGAGGGGACUUGAACCAAUGUCCUCCCAUCAUCAAGGGAGUUGCCUAACCAAUUGGCUAGGCAUGCCUCUUGGU |