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BaseInfo

ncRNA ID	novel_jre_miR453
Species	Juglans regia
Class	miRNA
Genome position	NW_017389865.1:75284-75393 [+]
Reference genome	wgs.5d
Source	SRR1170957;SRR1168881
Length	24
Mature sequence(if miRNA)	87 - UUUCAAAGCGACUGUACGGUACUU - 110
Stem-loop(if miRNA)	--ACG                     -------       --      UAU      AUU      UCGUGCAGUCGUUUUGAAAAA       GAGUAGA  GUCUAU   UAAAAA   A      |||||||||||||||||||||       |||||||  ||||||   ||||||   A      GGCAUGUCAGCGAAACUUUUU       UUUAUCU  UAGGUA   AUUUUU   U UUCAU                     UCACUUA       AC      --U      CUU
Stem-loop sequence	ACGUCGUGCAGUCGUUUUGAAAAAGAGUAGAGUCUAUUAUUAAAAAAUUAAUUUCUUUUUAUAUGGAUCAUCUAUUUAUUCACUUUUUUCAAAGCGACUGUACGGUACUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018980788.1	ncRNA:24   UUCAUGGCAUGUCAGCGAAACUUU   1   |||*=||||=|||||||||||||| targets:1608   AAGCGCCGUGCAGUCGCUUUGAAA   1631 Target Full Sequence	1.0	PREDICTED: Juglans regia histone-lysine N-methyltransferase ATXR2-like (LOC109002870), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_018994468.1	ncRNA:24   UUCAUGGCAUGUCAGCGAAACUUU   1   |||||||||=|||||*|||||||| targets:1452   AAGUACCGUGCAGUCACUUUGAAA   1475 Target Full Sequence	2.5	PREDICTED: Juglans regia serine/threonine-protein phosphatase PP1-like (LOC109012694), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_019004598.1	ncRNA:24   UUCAUGGCAUGUCAGCGAAACUUU   1   |||*==|*|=|||||||||||||| targets:1272   AAGCGUCAUGCAGUCGCUUUGAAA   1295 Target Full Sequence	3.0	PREDICTED: Juglans regia branched-chain-amino-acid aminotransferase 2, chloroplastic-like (LOC109021870), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_019004597.1	ncRNA:24   UUCAUGGCAUGUCAGCGAAACUUU   1   |||*==|*|=|||||||||||||| targets:1391   AAGCGUCAUGCAGUCGCUUUGAAA   1414 Target Full Sequence	3.0	PREDICTED: Juglans regia branched-chain-amino-acid aminotransferase 2, chloroplastic-like (LOC109021870), transcript variant X1, mRNA	NA	coding protein	psRNATarget