ncRNA ID | novel_jre_miR451 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017389666.1:627180-627301 [+] |
Reference genome | wgs.5d |
Source | SRR1170957 |
Length | 24 |
Mature sequence(if miRNA) | 99 - GUGUGAGAAUGAAUAGUGACUGAU - 122 |
Stem-loop(if miRNA) |
--              CAC              AUUAAAAAAAAC   UAUAUCUUAUAGAA   CAGUUAUUAUUUAU   CUCACACUCUACAC            UCU              A   ||||||||||||||   ||||||||||||||            |||              A   GUCAGUGAUAAGUA   GAGUGUGAGGUGUG            AGU              C UA              --A              -AAUAUUAAAAA   AUUCUAUACUCUCA |
Stem-loop sequence | CAGUUAUUAUUUAUCACCUCACACUCUACACAUUAAAAAAAACUCUUAUAUCUUAUAGAAAACACUCUCAUAUCUUAUGAAAAAAUUAUAAGUGUGGAGUGUGAGAAUGAAUAGUGACUGAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018987860.1 |
|
2.0 | PREDICTED: Juglans regia putative kinase-like protein TMKL1 (LOC109007948), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_018982907.1 |
|
2.5 | PREDICTED: Juglans regia microtubule-binding protein TANGLED-like (LOC109004374), mRNA | NA | coding protein | psRNATarget |