ncRNA ID | novel_jre_miR449 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017389255.1:431085-431171 [-] |
Reference genome | wgs.5d |
Source | SRR1170957;SRR1170958;SRR1170959;SRR1168796 |
Length | 23 |
Mature sequence(if miRNA) | 1 - CUCACUUCUCUUUCUGUCAGAUU - 23 |
Stem-loop(if miRNA) |
--A         -    -        A        CU       A    UUGACAGAA GAGA GUGAGCAC CAGAGGCA  UGGUAUA G    ||||||||| |||| |||||||| ||||||||  |||||||    GACUGUCUU CUCU CACUCGUG GUUUUCGU  AUCAUAU U UUA         U    U        C        -U       C |
Stem-loop sequence | AUUGACAGAAGAGAGUGAGCACACAGAGGCACUUGGUAUAAGUCUAUACUAUUGCUUUUGCGUGCUCACUUCUCUUUCUGUCAGAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018970420.1 |
|
2.5 | PREDICTED: Juglans regia uncharacterized LOC108994975 (LOC108994975), mRNA | NA | coding protein | psRNATarget |