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BaseInfo

ncRNA ID novel_jre_miR449
Species Juglans regia
Class miRNA
Genome position NW_017389255.1:431085-431171 [-]
Reference genome wgs.5d
Source SRR1170957;SRR1170958;SRR1170959;SRR1168796
Length 23
Mature sequence(if miRNA) 1 - CUCACUUCUCUUUCUGUCAGAUU - 23
Stem-loop(if miRNA) --A         -    -        A        CU       A
   UUGACAGAA GAGA GUGAGCAC CAGAGGCA  UGGUAUA G
   ||||||||| |||| |||||||| ||||||||  |||||||
   GACUGUCUU CUCU CACUCGUG GUUUUCGU  AUCAUAU U
UUA         U    U        C        -U       C
Stem-loop sequence AUUGACAGAAGAGAGUGAGCACACAGAGGCACUUGGUAUAAGUCUAUACUAUUGCUUUUGCGUGCUCACUUCUCUUUCUGUCAGAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018970420.1
ncRNA:23   UUAGACUGUCUUUCUCUUCACUC   1
  |||*|||||||||||||||||=*
targets:68   AAUAUGACAGAAAGAGAAGUGGC   90

2.5 PREDICTED: Juglans regia uncharacterized LOC108994975 (LOC108994975), mRNA NA coding protein psRNATarget