Search result

BaseInfo

ncRNA ID novel_jre_miR445
Species Juglans regia
Class miRNA
Genome position NW_017443592.1:583179-583347 [-]
Reference genome wgs.5d
Source SRR1170957
Length 24
Mature sequence(if miRNA) 146 - AAUGAUACAUGCAGUCGUAGAAUG - 169
Stem-loop(if miRNA) --    A            UA       C   CG   UGCAA            ---   ------  -A AG    C   U      UU
  AAUG UACAUGCAGUCG  GAAUGCG AAA  UCA     UUAUUUUGAAAA   UGA      GC  G  UCUA UAU AAAAAA  A
  |||| ||||||||||||  ||||||| |||  |||     ||||||||||||   |||      ||  |  |||| ||| ||||||
  UUAU AUGUAUGUCAGC  CUUACGU UUU  GGU     AGUGAAACUUUU   ACU      UG  C  GGAU AUA UUUUUU  A
CA    G            GC       A   AU   UUAUC            UUC   UAUUUA  CC CU    -   C      UU
Stem-loop sequence AAUGAUACAUGCAGUCGUAGAAUGCGCAAACGUCAUGCAAUUAUUUUGAAAAUGAGCAGAGUCUACUAUUAAAAAAUUAAUUUUUUUUCAUAUAGGUCCCCGUAUUUAUUCACUUUUUUCAAAGUGACUAUUUGGUAUUUAUGCAUUCCGCGACUGUAUGUAGUAUUAC