ncRNA ID | novel_jre_miR444 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017443521.1:317218-317318 [+] |
Reference genome | wgs.5d |
Source | SRR1170957 |
Length | 23 |
Mature sequence(if miRNA) | 79 - UAAUUGGAGAAUUGUAGGAAAAU - 101 |
Stem-loop(if miRNA) |
--A     U   -        G    -     --U       U        AU    UUCCU ACA UUCUUCGG UAUG UGGUU   GUAAGUU GUCAGCCC  U    ||||| ||| |||||||| |||| |||||   ||||||| ||||||||  A    AAGGA UGU AAGAGGUU AUAC AUCAG   UAUUCAG CGGUUGGG  A UAA     -   U        A    G     UGU       -        AU |
Stem-loop sequence | AUUCCUUACAUUCUUCGGGUAUGUGGUUUGUAAGUUUGUCAGCCCAUUAAUAGGGUUGGCGACUUAUUGUGACUAGCAUAAUUGGAGAAUUGUAGGAAAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018961942.1 |
|
3.0 | PREDICTED: Juglans regia potassium channel KAT1-like (LOC108988626), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_018961941.1 |
|
3.0 | PREDICTED: Juglans regia potassium channel KAT1-like (LOC108988626), transcript variant X1, mRNA | NA | coding protein | psRNATarget |