ncRNA ID | novel_jre_miR440 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017442667.1:56177-56328 [-] |
Reference genome | wgs.5d |
Source | SRR1170957 |
Length | 24 |
Mature sequence(if miRNA) | 129 - AACCACUAAGAGAUCUCAUAUAAG - 152 |
Stem-loop(if miRNA) |
--AA    U             U       CU          C       UACA             CUACUUUUA     CCAC AAGAGAUCUCAUA AAGUAAA  UACAAAUUGA AUGGUUU    UGAUAUGUUAGAU         U     |||| ||||||||||||| |||||||  |||||||||| |||||||    |||||||||||||     GGUG UUCUCUAGAGUGU UUUAUUU  GUGUUUGACU UAUCAAA    ACUAUGCAAUUUA         U AAUC    U             U       AG          A       CUAC             ACAUUUCGA |
Stem-loop sequence | AACCACUAAGAGAUCUCAUAUAAGUAAACUUACAAAUUGACAUGGUUUUACAUGAUAUGUUAGAUCUACUUUUAUUAGCUUUACAAUUUAACGUAUCACAUCAAACUAUAUCAGUUUGUGGAUUUAUUUUUGUGAGAUCUCUUUGUGGCUAA |