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BaseInfo

ncRNA ID novel_jre_miR436
Species Juglans regia
Class miRNA
Genome position NW_017439868.1:135-255 [+]
Reference genome wgs.5d
Source SRR1170957
Length 24
Mature sequence(if miRNA) 98 - AGAGAUUGCUCGGUACUUGCAUAC - 121
Stem-loop(if miRNA) --AUAG     UU CA                ---     -----   UU  C   U      U
      AAGUG  G  CAAUUUUUUUAAAAAA   GAGUG     AGA  CA UAU AAAAAA U
      |||||  |  ||||||||||||||||   |||||     |||  || ||| |||||| A
      UUCAU  C  GUUAGAGAAAUUUUUU   CUCAU     UCU  GU AUA UUUUUU A
CAUACG     GG UC                UGA     UUAUA   UG  U   C      U
Stem-loop sequence AUAGAAGUGUUGCACAAUUUUUUUAAAAAAGAGUGAGAUUCACUAUUAAAAAAUUAAUUUUUUUCAUAUUGGUUCUAUAUUUACUCAGUUUUUUUAAAGAGAUUGCUCGGUACUUGCAUAC