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BaseInfo

ncRNA ID	novel_jre_miR431
Species	Juglans regia
Class	miRNA
Genome position	NW_017437554.1:21292-21390 [+]
Reference genome	wgs.5d
Source	SRR1170957
Length	24
Mature sequence(if miRNA)	76 - CAUACUUGGAGAAUUGUAGGAAAA - 99
Stem-loop(if miRNA)	--     U   -             -     --U       UC       AU   UUCCU ACA UUCUUCGGGUAUG UGGUC   GUAAGUU  UCGGCCC  U   ||||| ||| ||||||||||||| |||||   |||||||  |||||||  A   AAGGA UGU AAGAGGUUCAUAC AUCAG   UAUUCAG  AGUUGGG  A AA     -   U             G     UGC       -U       AU
Stem-loop sequence	UUCCUUACAUUCUUCGGGUAUGUGGUCUGUAAGUUUCUCGGCCCAUUAAUAGGGUUGAUGACUUAUCGUGACUAGCAUACUUGGAGAAUUGUAGGAAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018953886.1	ncRNA:24   AAAAGGAUGUUAAGAGGUUCAUAC   1   ***||||**||||||||||||||| targets:2241   AAGUCCUCAAAUUCUCCAAGUAUG   2264 Target Full Sequence	2.0	PREDICTED: Juglans regia mediator of RNA polymerase II transcription subunit 13-like (LOC108982492), partial mRNA	NA	coding protein	psRNATarget
XM_018950623.1	ncRNA:24   AAAAGGAUGUUAAGAGGUUCAUAC   1   ***||||**||||||||||||||| targets:1312   AAGUCCUCAAAUUCUCCAAGUAUG   1335 Target Full Sequence	2.0	PREDICTED: Juglans regia mediator of RNA polymerase II transcription subunit 13-like (LOC108979858), mRNA	NA	coding protein	psRNATarget
XM_018966245.1	ncRNA:24   AAAAGGAUGUUAAGAGGUUCAUAC   1   *|||=|||||**|||||||||||| targets:4805   AUUUUCUACAUAUCUCCAAGUAUG   4828 Target Full Sequence	2.5	PREDICTED: Juglans regia ARF guanine-nucleotide exchange factor GNOM (LOC108991852), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018966246.1	ncRNA:24   AAAAGGAUGUUAAGAGGUUCAUAC   1   *|||=|||||**|||||||||||| targets:4812   AUUUUCUACAUAUCUCCAAGUAUG   4835 Target Full Sequence	2.5	PREDICTED: Juglans regia ARF guanine-nucleotide exchange factor GNOM (LOC108991852), transcript variant X2, mRNA	NA	coding protein	psRNATarget