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BaseInfo

ncRNA ID novel_jre_miR401
Species Juglans regia
Class miRNA
Genome position NW_017443635.1:103837-103889 [-]
Reference genome wgs.5d
Source SRR1170956
Length 24
Mature sequence(if miRNA) 1 - CAUUAAUGGAGAAUGCGCUUAAAC - 24
Stem-loop(if miRNA) --      A               CU
  UUAAGC CAUUCUCCAUUAAUG  U
  |||||| |||||||||||||||  G
  AAUUCG GUAAGAGGUAAUUAC  A
CA      C               CC
Stem-loop sequence UUAAGCACAUUCUCCAUUAAUGCUUGACCCAUUAAUGGAGAAUGCGCUUAAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018969997.1
ncRNA:24   CAAAUUCGCGUAAGAGGUAAUUAC   1
  **|*||||*|||*|||||||||||
targets:544   AGUCAAGCUCAUCCUCCAUUAAUG   567

2.5 PREDICTED: Juglans regia VQ motif-containing protein 8, chloroplastic-like (LOC108994686), mRNA NA coding protein psRNATarget