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BaseInfo

ncRNA ID	novel_jre_miR398
Species	Juglans regia
Class	miRNA
Genome position	NW_017443608.1:190031-190109 [+]
Reference genome	wgs.5d
Source	SRR1170956
Length	24
Mature sequence(if miRNA)	56 - UAACGGAUCAGAUGAAGCCACAUC - 79
Stem-loop(if miRNA)	--        G  G        CAAAUUAUAAAG       UA   UGUGGUUU AU UGGUUCGU            UUAUUUU  U   |||||||| || ||||||||            |||||||   ACACCGAA UA ACUAGGCA            GAUGGAA  U CU        G  G        -------AUCUA       UG
Stem-loop sequence	UGUGGUUUGAUGUGGUUCGUCAAAUUAUAAAGUUAUUUUUAUUGUAAGGUAGAUCUAACGGAUCAGAUGAAGCCACAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018984601.1	ncRNA:24   CUACACCGAAGUAGACUAGGCAAU   1   ||*|||*=|||||||||||||||| targets:2792   GACGUGAUUUCAUCUGAUCCGUUA   2815 Target Full Sequence	2.0	PREDICTED: Juglans regia cation/H(+) antiporter 18-like (LOC109005590), mRNA	NA	coding protein	psRNATarget
XM_018990357.1	ncRNA:24   CUACACCGAAGUAGACUAGGCAAU   1   ||*||||=|||||=|||||||||| targets:806   GACGUGGUUUCAUUUGAUCCGUUA   829 Target Full Sequence	2.5	PREDICTED: Juglans regia uncharacterized protein At4g29660 (LOC109009741), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018990349.1	ncRNA:24   CUACACCGAAGUAGACUAGGCAAU   1   ||*||||=|||||=|||||||||| targets:1102   GACGUGGUUUCAUUUGAUCCGUUA   1125 Target Full Sequence	2.5	PREDICTED: Juglans regia uncharacterized protein At4g29660 (LOC109009741), transcript variant X1, mRNA	NA	coding protein	psRNATarget