ncRNA ID | novel_jre_miR392 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017443593.1:423480-423639 [-] |
Reference genome | wgs.5d |
Source | SRR1170956 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGAGUGUGAAGCUUACGUGUAGCA - 24 |
Stem-loop(if miRNA) |
--A     A    UC        C       -CACUU            A            C C            AAAU    UAUAC UAAG  UCACACUC UGCACAC      AAAAGUAUGUGA UUUAUUCUUUUA C UCAUGUUUCAUG    A    ||||| ||||  |||||||| |||||||      |||||||||||| |||||||||||| | ||||||||||||    AUGUG AUUC  AGUGUGAG ACGUGUG      UUUUUAUACACU AAAUAAGAAAAU G AGUAUGAAGUAU    U ACG     C    GA        -       AUAAAU            A            A A            AAAG |
Stem-loop sequence | AUAUACAUAAGUCUCACACUCCUGCACACCACUUAAAAGUAUGUGAAUUUAUUCUUUUACCCUCAUGUUUCAUGAAAUAUGAAAUAUGAAGUAUGAAGAUAAAAGAAUAAAAUCACAUAUUUUUUAAAUAGUGUGCAGAGUGUGAAGCUUACGUGUAGCA |